RNA–Protein interactions for RNA: ENST00000487947.6

PDCD10-214, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-214ENST00000487947 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
PDCD10-214ENST00000487947 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
PDCD10-214ENST00000487947 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
PDCD10-214ENST00000487947 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
PDCD10-214ENST00000487947 FOXD1Q16676 465 aa20.9■□□□□ 0.94
PDCD10-214ENST00000487947 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
PDCD10-214ENST00000487947 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
PDCD10-214ENST00000487947 ADRA2BP18089 450 aa19.81■□□□□ 0.76
PDCD10-214ENST00000487947 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
PDCD10-214ENST00000487947 MSH5O43196 834 aa19.36■□□□□ 0.69
PDCD10-214ENST00000487947 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
PDCD10-214ENST00000487947 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
PDCD10-214ENST00000487947 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
PDCD10-214ENST00000487947 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
PDCD10-214ENST00000487947 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
PDCD10-214ENST00000487947 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
PDCD10-214ENST00000487947 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
PDCD10-214ENST00000487947 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
PDCD10-214ENST00000487947 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
PDCD10-214ENST00000487947 KCNA4P22459 653 aa17.19■□□□□ 0.34
PDCD10-214ENST00000487947 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
PDCD10-214ENST00000487947 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
PDCD10-214ENST00000487947 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
PDCD10-214ENST00000487947 RNF39Q9H2S5 420 aa16.58■□□□□ 0.24
PDCD10-214ENST00000487947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDCD10-214ENST00000487947 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
PDCD10-214ENST00000487947 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
PDCD10-214ENST00000487947 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
PDCD10-214ENST00000487947 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
PDCD10-214ENST00000487947 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
PDCD10-214ENST00000487947 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
PDCD10-214ENST00000487947 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
PDCD10-214ENST00000487947 CAPN15O75808 1086 aa15.84■□□□□ 0.13
PDCD10-214ENST00000487947 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
PDCD10-214ENST00000487947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
PDCD10-214ENST00000487947 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
PDCD10-214ENST00000487947 ZBTB22O15209 634 aa15.82■□□□□ 0.12
PDCD10-214ENST00000487947 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
PDCD10-214ENST00000487947 APLP2Q06481 763 aa15.74■□□□□ 0.11
PDCD10-214ENST00000487947 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
PDCD10-214ENST00000487947 DSG3P32926 999 aa15.66■□□□□ 0.1
PDCD10-214ENST00000487947 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
PDCD10-214ENST00000487947 ABCB7O75027 752 aa15.53■□□□□ 0.08
PDCD10-214ENST00000487947 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
PDCD10-214ENST00000487947 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
PDCD10-214ENST00000487947 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
PDCD10-214ENST00000487947 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
PDCD10-214ENST00000487947 POLA2Q14181 598 aa15.34■□□□□ 0.05
PDCD10-214ENST00000487947 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
PDCD10-214ENST00000487947 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
PDCD10-214ENST00000487947 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
PDCD10-214ENST00000487947 FBLN2P98095 1184 aa14.81□□□□□ -0.04
PDCD10-214ENST00000487947 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
PDCD10-214ENST00000487947 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
PDCD10-214ENST00000487947 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
PDCD10-214ENST00000487947 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
PDCD10-214ENST00000487947 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
PDCD10-214ENST00000487947 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
PDCD10-214ENST00000487947 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
PDCD10-214ENST00000487947 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
PDCD10-214ENST00000487947 SSUH2Q9Y2M2 353 aa14.45□□□□□ -0.1
PDCD10-214ENST00000487947 POTEHQ6S545 545 aa14.42□□□□□ -0.1
PDCD10-214ENST00000487947 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
PDCD10-214ENST00000487947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDCD10-214ENST00000487947 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
PDCD10-214ENST00000487947 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
PDCD10-214ENST00000487947 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
PDCD10-214ENST00000487947 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
PDCD10-214ENST00000487947 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDCD10-214ENST00000487947 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
PDCD10-214ENST00000487947 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
PDCD10-214ENST00000487947 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
PDCD10-214ENST00000487947 PROM2Q8N271 834 aa13.96□□□□□ -0.17
PDCD10-214ENST00000487947 FKBP8Q14318 412 aa13.95□□□□□ -0.18
PDCD10-214ENST00000487947 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
PDCD10-214ENST00000487947 HAX1O00165 279 aa13.84□□□□□ -0.19
PDCD10-214ENST00000487947 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
PDCD10-214ENST00000487947 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
PDCD10-214ENST00000487947 EVX2Q03828 476 aa13.74□□□□□ -0.21
PDCD10-214ENST00000487947 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
PDCD10-214ENST00000487947 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
PDCD10-214ENST00000487947 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
PDCD10-214ENST00000487947 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
PDCD10-214ENST00000487947 MIER1Q8N108 512 aa13.58□□□□□ -0.24
PDCD10-214ENST00000487947 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDCD10-214ENST00000487947 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
PDCD10-214ENST00000487947 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
PDCD10-214ENST00000487947 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
PDCD10-214ENST00000487947 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
PDCD10-214ENST00000487947 GABBR2O75899 941 aa13.42□□□□□ -0.26
PDCD10-214ENST00000487947 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
PDCD10-214ENST00000487947 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
PDCD10-214ENST00000487947 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
PDCD10-214ENST00000487947 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
PDCD10-214ENST00000487947 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
PDCD10-214ENST00000487947 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
PDCD10-214ENST00000487947 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
PDCD10-214ENST00000487947 NUBP1P53384 320 aa13.27□□□□□ -0.29
PDCD10-214ENST00000487947 CLCN6P51797 869 aa13.26□□□□□ -0.29
PDCD10-214ENST00000487947 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms