RNA–Protein interactions for RNA: ENST00000487599.1

ACTR1A-205, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 5 BASIC

Gene ACTR1A, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-205ENST00000487599 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
ACTR1A-205ENST00000487599 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
ACTR1A-205ENST00000487599 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
ACTR1A-205ENST00000487599 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
ACTR1A-205ENST00000487599 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
ACTR1A-205ENST00000487599 MYO15BQ96JP2 1530 aa19.38■□□□□ 0.69
ACTR1A-205ENST00000487599 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
ACTR1A-205ENST00000487599 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
ACTR1A-205ENST00000487599 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
ACTR1A-205ENST00000487599 HRCP23327 699 aa19.1■□□□□ 0.65
ACTR1A-205ENST00000487599 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
ACTR1A-205ENST00000487599 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
ACTR1A-205ENST00000487599 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
ACTR1A-205ENST00000487599 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.57
ACTR1A-205ENST00000487599 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
ACTR1A-205ENST00000487599 TRIM26Q12899 539 aaPredicted RBP18.46■□□□□ 0.55
ACTR1A-205ENST00000487599 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
ACTR1A-205ENST00000487599 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
ACTR1A-205ENST00000487599 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
ACTR1A-205ENST00000487599 ABCC9O60706 1549 aa18.34■□□□□ 0.53
ACTR1A-205ENST00000487599 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.51
ACTR1A-205ENST00000487599 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
ACTR1A-205ENST00000487599 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
ACTR1A-205ENST00000487599 ZEB1P37275 1124 aaPredicted RBP17.99■□□□□ 0.47
ACTR1A-205ENST00000487599 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
ACTR1A-205ENST00000487599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
ACTR1A-205ENST00000487599 WIZO95785 1651 aa17.92■□□□□ 0.46
ACTR1A-205ENST00000487599 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
ACTR1A-205ENST00000487599 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
ACTR1A-205ENST00000487599 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
ACTR1A-205ENST00000487599 NACADO15069 1562 aa17.7■□□□□ 0.42
ACTR1A-205ENST00000487599 CCDC88BA6NC98 1476 aa17.65■□□□□ 0.42
ACTR1A-205ENST00000487599 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
ACTR1A-205ENST00000487599 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
ACTR1A-205ENST00000487599 SOGA1O94964 1423 aa17.6■□□□□ 0.41
ACTR1A-205ENST00000487599 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.41
ACTR1A-205ENST00000487599 DIEXFQ68CQ4 756 aaKnown RBP17.56■□□□□ 0.4
ACTR1A-205ENST00000487599 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
ACTR1A-205ENST00000487599 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
ACTR1A-205ENST00000487599 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
ACTR1A-205ENST00000487599 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.39
ACTR1A-205ENST00000487599 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
ACTR1A-205ENST00000487599 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
ACTR1A-205ENST00000487599 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
ACTR1A-205ENST00000487599 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
ACTR1A-205ENST00000487599 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
ACTR1A-205ENST00000487599 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
ACTR1A-205ENST00000487599 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
ACTR1A-205ENST00000487599 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
ACTR1A-205ENST00000487599 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
ACTR1A-205ENST00000487599 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
ACTR1A-205ENST00000487599 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
ACTR1A-205ENST00000487599 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
ACTR1A-205ENST00000487599 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
ACTR1A-205ENST00000487599 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
ACTR1A-205ENST00000487599 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
ACTR1A-205ENST00000487599 MIER1Q8N108 512 aa17.23■□□□□ 0.35
ACTR1A-205ENST00000487599 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
ACTR1A-205ENST00000487599 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
ACTR1A-205ENST00000487599 CLIP1P30622 1438 aa17.15■□□□□ 0.34
ACTR1A-205ENST00000487599 EEA1Q15075 1411 aa17.14■□□□□ 0.33
ACTR1A-205ENST00000487599 APLP2Q06481 763 aa17.12■□□□□ 0.33
ACTR1A-205ENST00000487599 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
ACTR1A-205ENST00000487599 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
ACTR1A-205ENST00000487599 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
ACTR1A-205ENST00000487599 VPS8Q8N3P4 1428 aa17.01■□□□□ 0.31
ACTR1A-205ENST00000487599 ITGAEP38570 1179 aa16.98■□□□□ 0.31
ACTR1A-205ENST00000487599 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
ACTR1A-205ENST00000487599 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
ACTR1A-205ENST00000487599 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
ACTR1A-205ENST00000487599 KIF21BO75037 1637 aa16.95■□□□□ 0.3
ACTR1A-205ENST00000487599 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
ACTR1A-205ENST00000487599 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
ACTR1A-205ENST00000487599 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
ACTR1A-205ENST00000487599 KCNH8Q96L42 1107 aa16.77■□□□□ 0.28
ACTR1A-205ENST00000487599 TOP2BQ02880 1626 aa16.77■□□□□ 0.27
ACTR1A-205ENST00000487599 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
ACTR1A-205ENST00000487599 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
ACTR1A-205ENST00000487599 P3H3Q8IVL6 736 aa16.69■□□□□ 0.26
ACTR1A-205ENST00000487599 CUX1P39880 1505 aa16.68■□□□□ 0.26
ACTR1A-205ENST00000487599 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
ACTR1A-205ENST00000487599 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
ACTR1A-205ENST00000487599 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
ACTR1A-205ENST00000487599 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
ACTR1A-205ENST00000487599 BCANQ96GW7 911 aa16.63■□□□□ 0.25
ACTR1A-205ENST00000487599 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
ACTR1A-205ENST00000487599 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
ACTR1A-205ENST00000487599 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
ACTR1A-205ENST00000487599 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
ACTR1A-205ENST00000487599 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
ACTR1A-205ENST00000487599 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
ACTR1A-205ENST00000487599 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
ACTR1A-205ENST00000487599 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
ACTR1A-205ENST00000487599 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
ACTR1A-205ENST00000487599 CUX2O14529 1486 aa16.54■□□□□ 0.24
ACTR1A-205ENST00000487599 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
ACTR1A-205ENST00000487599 IGF1RP08069 1367 aa16.49■□□□□ 0.23
ACTR1A-205ENST00000487599 MAPKBP1O60336 1514 aa16.49■□□□□ 0.23
ACTR1A-205ENST00000487599 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
ACTR1A-205ENST00000487599 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms