RNA–Protein interactions for RNA: ENST00000486993.1

SGPL1-204, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 1 (best)

Gene SGPL1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-204ENST00000486993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.06■■□□□ 1.121e-52■■■■■ 1167.3
SGPL1-204ENST00000486993 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.49■□□□□ 0.711e-82■■■■■ 900.1
SGPL1-204ENST00000486993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.14■■□□□ 1.452e-107■■■■■ 542.7
SGPL1-204ENST00000486993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.38■■□□□ 1.011e-68■■■■■ 287.9
SGPL1-204ENST00000486993 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.55■■□□□ 1.521e-323■■■■■ 245.1
SGPL1-204ENST00000486993 AARSP49588 968 aaKnown RBP eCLIP22.3■■□□□ 1.165e-25■■■■■ 227
SGPL1-204ENST00000486993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.46■■□□□ 1.518e-29■■■■■ 170.2
SGPL1-204ENST00000486993 ZRANB2O95218 330 aaKnown RBP eCLIP20.66■□□□□ 0.92e-43■■■■■ 142.3
SGPL1-204ENST00000486993 PUS1Q9Y606 427 aaKnown RBP eCLIP15.44■□□□□ 0.064e-60■■■■■ 137.8
SGPL1-204ENST00000486993 WDR43Q15061 677 aaKnown RBP eCLIP27.28■■□□□ 1.961e-323■■■■■ 131.2
SGPL1-204ENST00000486993 SND1Q7KZF4 910 aaKnown RBP eCLIP21.35■■□□□ 1.011e-21■■■■■ 120.5
SGPL1-204ENST00000486993 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.93■□□□□ 0.629e-8■■■■■ 117.9
SGPL1-204ENST00000486993 RPS11P62280 158 aaKnown RBP eCLIP16.74■□□□□ 0.271e-26■■■■■ 104.6
SGPL1-204ENST00000486993 SMNDC1O75940 238 aaKnown RBP eCLIP18.56■□□□□ 0.565e-8■■■■■ 91
SGPL1-204ENST00000486993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.27■■□□□ 1.169e-37■■■■■ 83.1
SGPL1-204ENST00000486993 LARP7Q4G0J3 582 aaKnown RBP eCLIP20■□□□□ 0.791e-13■■■■■ 82.2
SGPL1-204ENST00000486993 TROVE2P10155 538 aaKnown RBP eCLIP18.36■□□□□ 0.534e-66■■■■■ 80.6
SGPL1-204ENST00000486993 SF3B1O75533 1304 aaKnown RBP eCLIP22.56■■□□□ 1.22e-9■■■■■ 80.4
SGPL1-204ENST00000486993 NPM1P06748 294 aaKnown RBP eCLIP34.54■■■■□ 3.124e-73■■■■■ 67
SGPL1-204ENST00000486993 ILF3Q12906 894 aaKnown RBP eCLIP20.52■□□□□ 0.881e-11■■■■■ 62
SGPL1-204ENST00000486993 EFTUD2Q15029 972 aaKnown RBP eCLIP19.6■□□□□ 0.735e-8■■■■■ 56.5
SGPL1-204ENST00000486993 WRNQ14191 1432 aaPredicted RBP eCLIP36.13■■■■□ 3.373e-76■■■■■ 50.5
SGPL1-204ENST00000486993 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.34■■□□□ 1.014e-9■■■■■ 50.2
SGPL1-204ENST00000486993 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.19■□□□□ 0.827e-20■■■■■ 49.7
SGPL1-204ENST00000486993 DDX21Q9NR30 783 aaKnown RBP eCLIP26.77■■□□□ 1.886e-9■■■■■ 42.6
SGPL1-204ENST00000486993 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.39■■□□□ 1.495e-7■■■■■ 39.7
SGPL1-204ENST00000486993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.7■■□□□ 1.065e-29■■■■■ 39.5
SGPL1-204ENST00000486993 PCBP2Q15366 365 aaKnown RBP eCLIP19.35■□□□□ 0.699e-11■■■■■ 37.6
SGPL1-204ENST00000486993 DDX3XO00571 662 aaKnown RBP eCLIP21.13■□□□□ 0.977e-44■■■■■ 35.5
SGPL1-204ENST00000486993 RPS3P23396 243 aaKnown RBP eCLIP19.99■□□□□ 0.792e-67■■■■■ 32.6
SGPL1-204ENST00000486993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.68■□□□□ 0.97e-10■■■■■ 31.8
SGPL1-204ENST00000486993 NCBP2P52298 156 aaKnown RBP eCLIP18.96■□□□□ 0.632e-17■■■■■ 30.4
SGPL1-204ENST00000486993 DDX6P26196 483 aaKnown RBP eCLIP21.95■■□□□ 1.12e-6■■■■□ 26
SGPL1-204ENST00000486993 PABPC4Q13310 644 aaKnown RBP eCLIP24.79■■□□□ 1.561e-6■■■■□ 25.7
SGPL1-204ENST00000486993 SLBPQ14493 270 aaKnown RBP eCLIP19.51■□□□□ 0.713e-9■■■■□ 24.9
SGPL1-204ENST00000486993 XRCC6P12956 609 aaKnown RBP eCLIP22.95■■□□□ 1.264e-7■■■■□ 24.3
SGPL1-204ENST00000486993 PRPF4O43172 522 aaKnown RBP eCLIP19.63■□□□□ 0.731e-6■■■■□ 21.8
SGPL1-204ENST00000486993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.22■■□□□ 1.637e-9■■■■□ 21.3
SGPL1-204ENST00000486993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.4■□□□□ 0.73e-8■■■■□ 20.3
SGPL1-204ENST00000486993 FXR2P51116 673 aaKnown RBP eCLIP22.95■■□□□ 1.261e-9■■■■□ 19.7
SGPL1-204ENST00000486993 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■■■■□ 19.5
SGPL1-204ENST00000486993 NSUN2Q08J23 767 aaKnown RBP eCLIP20.82■□□□□ 0.922e-10■■■□□ 15.5
SGPL1-204ENST00000486993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.94■■■□□ 2.067e-7■■■□□ 14.8
SGPL1-204ENST00000486993 GTF2F1P35269 517 aaKnown RBP eCLIP22.81■■□□□ 1.246e-14■■■□□ 14.6
SGPL1-204ENST00000486993 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.15■□□□□ 0.981e-7■■□□□ 14.1
SGPL1-204ENST00000486993 RBM5P52756 815 aaKnown RBP eCLIP25.67■■□□□ 1.73e-23■■□□□ 13.9
SGPL1-204ENST00000486993 NKRFO15226 690 aaKnown RBP eCLIP23.82■■□□□ 1.47e-6■■□□□ 12.8
SGPL1-204ENST00000486993 QKIQ96PU8 341 aaKnown RBP eCLIP20.55■□□□□ 0.889e-13■■□□□ 12.8
SGPL1-204ENST00000486993 SFPQP23246 707 aaKnown RBP eCLIP23.01■■□□□ 1.271e-8■■□□□ 12.6
SGPL1-204ENST00000486993 GRSF1Q12849 480 aaKnown RBP eCLIP21.76■■□□□ 1.072e-8■■□□□ 11.7
SGPL1-204ENST00000486993 LSM11P83369 360 aaKnown RBP eCLIP17.94■□□□□ 0.462e-9■□□□□ 10.9
SGPL1-204ENST00000486993 TRA2AQ13595 282 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■□□□□ 10.8
SGPL1-204ENST00000486993 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.99■■□□□ 1.594e-9■□□□□ 10.2
SGPL1-204ENST00000486993 YWHAGP61981 247 aaKnown RBP eCLIP21.67■■□□□ 1.061e-12■□□□□ 10.1
SGPL1-204ENST00000486993 RBM22Q9NW64 420 aaKnown RBP eCLIP20.75■□□□□ 0.911e-15■□□□□ 9.8
SGPL1-204ENST00000486993 PPIGQ13427 754 aaKnown RBP eCLIP23.65■■□□□ 1.385e-11■□□□□ 9.3
SGPL1-204ENST00000486993 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.64■□□□□ 0.412e-9■□□□□ 9.1
SGPL1-204ENST00000486993 SF3A3Q12874 501 aaKnown RBP eCLIP18.39■□□□□ 0.532e-33■□□□□ 9
SGPL1-204ENST00000486993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.51■■□□□ 1.198e-13■□□□□ 8.2
Retrieved 59 of 59 RNA–protein pairs in 10.1 ms