RNA–Protein interactions for RNA: ENST00000486131.1

NOM1-207, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 2

Gene NOM1, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-207ENST00000486131 AEBP2Q6ZN18 517 aaPredicted RBP32.88■■■□□ 2.85
NOM1-207ENST00000486131 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
NOM1-207ENST00000486131 SENP3Q9H4L4 574 aaPredicted RBP28.05■■■□□ 2.08
NOM1-207ENST00000486131 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
NOM1-207ENST00000486131 FOXD1Q16676 465 aa26.07■■□□□ 1.76
NOM1-207ENST00000486131 PLPPR3Q6T4P5 718 aa25.44■■□□□ 1.66
NOM1-207ENST00000486131 PPP6R1Q9UPN7 881 aa24.63■■□□□ 1.53
NOM1-207ENST00000486131 ADRA2BP18089 450 aa24.58■■□□□ 1.53
NOM1-207ENST00000486131 PIAS4Q8N2W9 510 aaPredicted RBP24.46■■□□□ 1.51
NOM1-207ENST00000486131 MSH5O43196 834 aa24.3■■□□□ 1.48
NOM1-207ENST00000486131 POTEDQ86YR6 584 aa23.07■■□□□ 1.28
NOM1-207ENST00000486131 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
NOM1-207ENST00000486131 MAPK8IP2Q13387 824 aaPredicted RBP22.46■■□□□ 1.19
NOM1-207ENST00000486131 PPP4R3CPQ6ZMV5 832 aa22.33■■□□□ 1.17
NOM1-207ENST00000486131 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
NOM1-207ENST00000486131 CNKSR2Q8WXI2 1034 aa21.85■■□□□ 1.09
NOM1-207ENST00000486131 NCBP3Q53F19 620 aaKnown RBP21.62■■□□□ 1.05
NOM1-207ENST00000486131 HOXD11P31277 338 aaPredicted RBP21.61■■□□□ 1.05
NOM1-207ENST00000486131 RNF216Q9NWF9 866 aaPredicted RBP21.55■■□□□ 1.04
NOM1-207ENST00000486131 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
NOM1-207ENST00000486131 NPM3O75607 178 aaKnown RBP21.25■□□□□ 0.99
NOM1-207ENST00000486131 KCNA4P22459 653 aa21.16■□□□□ 0.98
NOM1-207ENST00000486131 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
NOM1-207ENST00000486131 RNF39Q9H2S5 420 aa20.74■□□□□ 0.91
NOM1-207ENST00000486131 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
NOM1-207ENST00000486131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
NOM1-207ENST00000486131 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
NOM1-207ENST00000486131 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
NOM1-207ENST00000486131 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
NOM1-207ENST00000486131 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
NOM1-207ENST00000486131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
NOM1-207ENST00000486131 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
NOM1-207ENST00000486131 SPINK5Q9NQ38 1064 aaPredicted RBP19.77■□□□□ 0.76
NOM1-207ENST00000486131 CAPN15O75808 1086 aa19.75■□□□□ 0.75
NOM1-207ENST00000486131 APLP2Q06481 763 aa19.73■□□□□ 0.75
NOM1-207ENST00000486131 MYCNP04198 464 aaPredicted RBP19.68■□□□□ 0.74
NOM1-207ENST00000486131 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
NOM1-207ENST00000486131 FOXD4L1Q9NU39 408 aa19.66■□□□□ 0.74
NOM1-207ENST00000486131 DSG3P32926 999 aa19.54■□□□□ 0.72
NOM1-207ENST00000486131 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
NOM1-207ENST00000486131 ZNF219Q9P2Y4 722 aaPredicted RBP19.52■□□□□ 0.72
NOM1-207ENST00000486131 ZBTB22O15209 634 aa19.43■□□□□ 0.7
NOM1-207ENST00000486131 ABCB7O75027 752 aa19.3■□□□□ 0.68
NOM1-207ENST00000486131 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.65
NOM1-207ENST00000486131 POLA2Q14181 598 aa19.08■□□□□ 0.64
NOM1-207ENST00000486131 ATXN8OSP0DMR3 200 aa19.04■□□□□ 0.64
NOM1-207ENST00000486131 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
NOM1-207ENST00000486131 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
NOM1-207ENST00000486131 ZBTB12Q9Y330 459 aaPredicted RBP18.75■□□□□ 0.59
NOM1-207ENST00000486131 RBM42Q9BTD8 480 aaKnown RBP18.68■□□□□ 0.58
NOM1-207ENST00000486131 FBLN2P98095 1184 aa18.44■□□□□ 0.54
NOM1-207ENST00000486131 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
NOM1-207ENST00000486131 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
NOM1-207ENST00000486131 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
NOM1-207ENST00000486131 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
NOM1-207ENST00000486131 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
NOM1-207ENST00000486131 SPDYE2Q495Y8 402 aa18.19■□□□□ 0.5
NOM1-207ENST00000486131 POTEHQ6S545 545 aa18.16■□□□□ 0.5
NOM1-207ENST00000486131 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
NOM1-207ENST00000486131 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
NOM1-207ENST00000486131 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
NOM1-207ENST00000486131 SSUH2Q9Y2M2 353 aa17.96■□□□□ 0.47
NOM1-207ENST00000486131 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
NOM1-207ENST00000486131 SPDYE1Q8NFV5 336 aaPredicted RBP17.79■□□□□ 0.44
NOM1-207ENST00000486131 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
NOM1-207ENST00000486131 PIP4P2Q8N4L2 257 aa17.73■□□□□ 0.43
NOM1-207ENST00000486131 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
NOM1-207ENST00000486131 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
NOM1-207ENST00000486131 SPDYE4A6NLX3 237 aa17.64■□□□□ 0.41
NOM1-207ENST00000486131 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
NOM1-207ENST00000486131 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
NOM1-207ENST00000486131 STAG3Q9UJ98 1225 aa17.39■□□□□ 0.37
NOM1-207ENST00000486131 HAX1O00165 279 aa17.34■□□□□ 0.37
NOM1-207ENST00000486131 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
NOM1-207ENST00000486131 PROM2Q8N271 834 aa17.26■□□□□ 0.35
NOM1-207ENST00000486131 SP7Q8TDD2 431 aaPredicted RBP17.2■□□□□ 0.34
NOM1-207ENST00000486131 FARP1Q9Y4F1 1045 aaPredicted RBP17.13■□□□□ 0.33
NOM1-207ENST00000486131 FKBP8Q14318 412 aa17.12■□□□□ 0.33
NOM1-207ENST00000486131 CREBZFQ9NS37 354 aa17.12■□□□□ 0.33
NOM1-207ENST00000486131 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
NOM1-207ENST00000486131 EVX2Q03828 476 aa17.1■□□□□ 0.33
NOM1-207ENST00000486131 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
NOM1-207ENST00000486131 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
NOM1-207ENST00000486131 MNX1P50219 401 aaPredicted RBP16.86■□□□□ 0.29
NOM1-207ENST00000486131 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
NOM1-207ENST00000486131 MIER1Q8N108 512 aa16.8■□□□□ 0.28
NOM1-207ENST00000486131 GABBR2O75899 941 aa16.77■□□□□ 0.28
NOM1-207ENST00000486131 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
NOM1-207ENST00000486131 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
NOM1-207ENST00000486131 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
NOM1-207ENST00000486131 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
NOM1-207ENST00000486131 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
NOM1-207ENST00000486131 CLCN6P51797 869 aa16.69■□□□□ 0.26
NOM1-207ENST00000486131 ZBTB47Q9UFB7 747 aaPredicted RBP16.6■□□□□ 0.25
NOM1-207ENST00000486131 PHF12Q96QT6 1004 aa16.53■□□□□ 0.24
NOM1-207ENST00000486131 TSPYL2Q9H2G4 693 aaPredicted RBP16.53■□□□□ 0.24
NOM1-207ENST00000486131 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
NOM1-207ENST00000486131 VASPP50552 380 aaPredicted RBP16.46■□□□□ 0.23
NOM1-207ENST00000486131 GALR2O43603 387 aaPredicted RBP16.45■□□□□ 0.22
NOM1-207ENST00000486131 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms