RNA–Protein interactions for RNA: ENST00000486086.1

GTF2IRD1-206, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 2

Gene GTF2IRD1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-206ENST00000486086 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
GTF2IRD1-206ENST00000486086 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
GTF2IRD1-206ENST00000486086 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
GTF2IRD1-206ENST00000486086 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
GTF2IRD1-206ENST00000486086 FOXD1Q16676 465 aa15.99■□□□□ 0.15
GTF2IRD1-206ENST00000486086 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
GTF2IRD1-206ENST00000486086 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
GTF2IRD1-206ENST00000486086 ADRA2BP18089 450 aa15□□□□□ -0.01
GTF2IRD1-206ENST00000486086 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
GTF2IRD1-206ENST00000486086 MSH5O43196 834 aa14.93□□□□□ -0.02
GTF2IRD1-206ENST00000486086 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
GTF2IRD1-206ENST00000486086 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
GTF2IRD1-206ENST00000486086 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
GTF2IRD1-206ENST00000486086 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
GTF2IRD1-206ENST00000486086 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
GTF2IRD1-206ENST00000486086 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
GTF2IRD1-206ENST00000486086 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
GTF2IRD1-206ENST00000486086 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
GTF2IRD1-206ENST00000486086 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
GTF2IRD1-206ENST00000486086 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
GTF2IRD1-206ENST00000486086 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
GTF2IRD1-206ENST00000486086 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
GTF2IRD1-206ENST00000486086 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
GTF2IRD1-206ENST00000486086 KCNA4P22459 653 aa12.74□□□□□ -0.37
GTF2IRD1-206ENST00000486086 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
GTF2IRD1-206ENST00000486086 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
GTF2IRD1-206ENST00000486086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.4
GTF2IRD1-206ENST00000486086 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
GTF2IRD1-206ENST00000486086 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
GTF2IRD1-206ENST00000486086 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
GTF2IRD1-206ENST00000486086 CAPN15O75808 1086 aa12.05□□□□□ -0.48
GTF2IRD1-206ENST00000486086 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
GTF2IRD1-206ENST00000486086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
GTF2IRD1-206ENST00000486086 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
GTF2IRD1-206ENST00000486086 APLP2Q06481 763 aa12□□□□□ -0.49
GTF2IRD1-206ENST00000486086 DSG3P32926 999 aa11.98□□□□□ -0.49
GTF2IRD1-206ENST00000486086 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
GTF2IRD1-206ENST00000486086 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
GTF2IRD1-206ENST00000486086 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
GTF2IRD1-206ENST00000486086 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
GTF2IRD1-206ENST00000486086 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
GTF2IRD1-206ENST00000486086 ABCB7O75027 752 aa11.77□□□□□ -0.53
GTF2IRD1-206ENST00000486086 ZBTB22O15209 634 aa11.72□□□□□ -0.53
GTF2IRD1-206ENST00000486086 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
GTF2IRD1-206ENST00000486086 POLA2Q14181 598 aa11.61□□□□□ -0.55
GTF2IRD1-206ENST00000486086 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
GTF2IRD1-206ENST00000486086 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
GTF2IRD1-206ENST00000486086 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
GTF2IRD1-206ENST00000486086 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
GTF2IRD1-206ENST00000486086 POTEHQ6S545 545 aa11.26□□□□□ -0.61
GTF2IRD1-206ENST00000486086 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
GTF2IRD1-206ENST00000486086 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
GTF2IRD1-206ENST00000486086 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
GTF2IRD1-206ENST00000486086 FBLN2P98095 1184 aa11.17□□□□□ -0.62
GTF2IRD1-206ENST00000486086 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
GTF2IRD1-206ENST00000486086 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
GTF2IRD1-206ENST00000486086 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
GTF2IRD1-206ENST00000486086 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
GTF2IRD1-206ENST00000486086 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
GTF2IRD1-206ENST00000486086 SPDYE2Q495Y8 402 aa11.07□□□□□ -0.64
GTF2IRD1-206ENST00000486086 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
GTF2IRD1-206ENST00000486086 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
GTF2IRD1-206ENST00000486086 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
GTF2IRD1-206ENST00000486086 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
GTF2IRD1-206ENST00000486086 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
GTF2IRD1-206ENST00000486086 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
GTF2IRD1-206ENST00000486086 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
GTF2IRD1-206ENST00000486086 CLEC11AQ9Y240 323 aa10.77□□□□□ -0.69
GTF2IRD1-206ENST00000486086 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
GTF2IRD1-206ENST00000486086 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
GTF2IRD1-206ENST00000486086 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
GTF2IRD1-206ENST00000486086 HAX1O00165 279 aa10.63□□□□□ -0.71
GTF2IRD1-206ENST00000486086 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
GTF2IRD1-206ENST00000486086 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
GTF2IRD1-206ENST00000486086 STAG3Q9UJ98 1225 aa10.53□□□□□ -0.72
GTF2IRD1-206ENST00000486086 EVX2Q03828 476 aa10.52□□□□□ -0.73
GTF2IRD1-206ENST00000486086 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
GTF2IRD1-206ENST00000486086 PROM2Q8N271 834 aa10.45□□□□□ -0.74
GTF2IRD1-206ENST00000486086 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
GTF2IRD1-206ENST00000486086 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
GTF2IRD1-206ENST00000486086 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
GTF2IRD1-206ENST00000486086 GABBR2O75899 941 aa10.29□□□□□ -0.76
GTF2IRD1-206ENST00000486086 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
GTF2IRD1-206ENST00000486086 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
GTF2IRD1-206ENST00000486086 CLCN6P51797 869 aa10.23□□□□□ -0.77
GTF2IRD1-206ENST00000486086 FKBP8Q14318 412 aa10.22□□□□□ -0.77
GTF2IRD1-206ENST00000486086 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
GTF2IRD1-206ENST00000486086 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
GTF2IRD1-206ENST00000486086 PAK3O75914 559 aaPredicted RBP10.15□□□□□ -0.78
GTF2IRD1-206ENST00000486086 MIER1Q8N108 512 aa10.13□□□□□ -0.79
GTF2IRD1-206ENST00000486086 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
GTF2IRD1-206ENST00000486086 POTEIP0CG38 1075 aa10.08□□□□□ -0.8
GTF2IRD1-206ENST00000486086 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
GTF2IRD1-206ENST00000486086 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
GTF2IRD1-206ENST00000486086 GALR2O43603 387 aaPredicted RBP10.05□□□□□ -0.8
GTF2IRD1-206ENST00000486086 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
GTF2IRD1-206ENST00000486086 TSPYL2Q9H2G4 693 aaPredicted RBP10.02□□□□□ -0.81
GTF2IRD1-206ENST00000486086 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
GTF2IRD1-206ENST00000486086 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
GTF2IRD1-206ENST00000486086 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms