RNA–Protein interactions for RNA: ENST00000485249.1

KDM4A-205, Transcript of lysine demethylase 4A, humanhuman

TSL 3

Gene KDM4A, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-205ENST00000485249 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
KDM4A-205ENST00000485249 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
KDM4A-205ENST00000485249 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
KDM4A-205ENST00000485249 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
KDM4A-205ENST00000485249 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
KDM4A-205ENST00000485249 FOXD1Q16676 465 aa14.91□□□□□ -0.02
KDM4A-205ENST00000485249 ADRA2BP18089 450 aa14.58□□□□□ -0.08
KDM4A-205ENST00000485249 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
KDM4A-205ENST00000485249 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
KDM4A-205ENST00000485249 PIAS4Q8N2W9 510 aaPredicted RBP14.15□□□□□ -0.14
KDM4A-205ENST00000485249 KCNA4P22459 653 aa13.75□□□□□ -0.21
KDM4A-205ENST00000485249 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
KDM4A-205ENST00000485249 MSH5O43196 834 aa13.65□□□□□ -0.22
KDM4A-205ENST00000485249 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
KDM4A-205ENST00000485249 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
KDM4A-205ENST00000485249 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
KDM4A-205ENST00000485249 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
KDM4A-205ENST00000485249 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
KDM4A-205ENST00000485249 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
KDM4A-205ENST00000485249 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
KDM4A-205ENST00000485249 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
KDM4A-205ENST00000485249 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
KDM4A-205ENST00000485249 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
KDM4A-205ENST00000485249 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
KDM4A-205ENST00000485249 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
KDM4A-205ENST00000485249 ZBTB22O15209 634 aa12.67□□□□□ -0.38
KDM4A-205ENST00000485249 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
KDM4A-205ENST00000485249 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
KDM4A-205ENST00000485249 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
KDM4A-205ENST00000485249 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
KDM4A-205ENST00000485249 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
KDM4A-205ENST00000485249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.462e-6■■■■□ 20.7
KDM4A-205ENST00000485249 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
KDM4A-205ENST00000485249 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
KDM4A-205ENST00000485249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
KDM4A-205ENST00000485249 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
KDM4A-205ENST00000485249 ABCC9O60706 1549 aa12□□□□□ -0.49
KDM4A-205ENST00000485249 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
KDM4A-205ENST00000485249 ZCCHC6Q5VYS8 1495 aaKnown RBP11.94□□□□□ -0.5
KDM4A-205ENST00000485249 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
KDM4A-205ENST00000485249 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
KDM4A-205ENST00000485249 APLP2Q06481 763 aa11.8□□□□□ -0.52
KDM4A-205ENST00000485249 DCAF1Q9Y4B6 1507 aa11.77□□□□□ -0.52
KDM4A-205ENST00000485249 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
KDM4A-205ENST00000485249 MYO15BQ96JP2 1530 aa11.69□□□□□ -0.54
KDM4A-205ENST00000485249 NACADO15069 1562 aa11.68□□□□□ -0.54
KDM4A-205ENST00000485249 DCAF8L2P0C7V8 631 aa11.68□□□□□ -0.54
KDM4A-205ENST00000485249 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
KDM4A-205ENST00000485249 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
KDM4A-205ENST00000485249 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
KDM4A-205ENST00000485249 FKBP8Q14318 412 aa11.58□□□□□ -0.56
KDM4A-205ENST00000485249 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
KDM4A-205ENST00000485249 UNC13AQ9UPW8 1703 aa11.54□□□□□ -0.56
KDM4A-205ENST00000485249 TRHP20396 242 aaPredicted RBP11.51□□□□□ -0.57
KDM4A-205ENST00000485249 CAPN15O75808 1086 aa11.5□□□□□ -0.57
KDM4A-205ENST00000485249 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
KDM4A-205ENST00000485249 SHROOM4Q9ULL8 1493 aa11.43□□□□□ -0.58
KDM4A-205ENST00000485249 POLA2Q14181 598 aa11.4□□□□□ -0.58
KDM4A-205ENST00000485249 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
KDM4A-205ENST00000485249 BICRAQ9NZM4 1560 aa11.38□□□□□ -0.59
KDM4A-205ENST00000485249 FBLN2P98095 1184 aa11.36□□□□□ -0.59
KDM4A-205ENST00000485249 ABCB7O75027 752 aa11.31□□□□□ -0.6
KDM4A-205ENST00000485249 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-205ENST00000485249 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
KDM4A-205ENST00000485249 DSG3P32926 999 aa11.26□□□□□ -0.61
KDM4A-205ENST00000485249 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
KDM4A-205ENST00000485249 PROM2Q8N271 834 aa11.19□□□□□ -0.62
KDM4A-205ENST00000485249 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
KDM4A-205ENST00000485249 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
KDM4A-205ENST00000485249 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
KDM4A-205ENST00000485249 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
KDM4A-205ENST00000485249 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
KDM4A-205ENST00000485249 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
KDM4A-205ENST00000485249 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
KDM4A-205ENST00000485249 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
KDM4A-205ENST00000485249 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
KDM4A-205ENST00000485249 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
KDM4A-205ENST00000485249 SMARCA4P51532 1647 aa11.02□□□□□ -0.65
KDM4A-205ENST00000485249 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
KDM4A-205ENST00000485249 BAZ1AQ9NRL2 1556 aaPredicted RBP10.99□□□□□ -0.65
KDM4A-205ENST00000485249 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
KDM4A-205ENST00000485249 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
KDM4A-205ENST00000485249 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
KDM4A-205ENST00000485249 VASPP50552 380 aaPredicted RBP10.96□□□□□ -0.65
KDM4A-205ENST00000485249 WIZO95785 1651 aa10.95□□□□□ -0.66
KDM4A-205ENST00000485249 CC2D2AQ9P2K1 1620 aa10.89□□□□□ -0.67
KDM4A-205ENST00000485249 PEG3Q9GZU2 1588 aa10.89□□□□□ -0.67
KDM4A-205ENST00000485249 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
KDM4A-205ENST00000485249 SUPT5HO00267 1087 aaKnown RBP10.83□□□□□ -0.68
KDM4A-205ENST00000485249 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
KDM4A-205ENST00000485249 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
KDM4A-205ENST00000485249 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
KDM4A-205ENST00000485249 NCAPD3P42695 1498 aa10.78□□□□□ -0.68
KDM4A-205ENST00000485249 TOP2AP11388 1531 aaKnown RBP10.78□□□□□ -0.68
KDM4A-205ENST00000485249 HMGXB3Q12766 1538 aa10.77□□□□□ -0.69
KDM4A-205ENST00000485249 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
KDM4A-205ENST00000485249 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
KDM4A-205ENST00000485249 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
KDM4A-205ENST00000485249 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
KDM4A-205ENST00000485249 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms