RNA–Protein interactions for RNA: ENST00000485171.1

KDM3A-212, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 556 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-212ENST00000485171 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
KDM3A-212ENST00000485171 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
KDM3A-212ENST00000485171 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
KDM3A-212ENST00000485171 SENP3Q9H4L4 574 aaPredicted RBP12.93□□□□□ -0.34
KDM3A-212ENST00000485171 PLPPR3Q6T4P5 718 aa12.54□□□□□ -0.4
KDM3A-212ENST00000485171 FOXD1Q16676 465 aa11.86□□□□□ -0.51
KDM3A-212ENST00000485171 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
KDM3A-212ENST00000485171 ADRA2BP18089 450 aa11.64□□□□□ -0.55
KDM3A-212ENST00000485171 PPP6R1Q9UPN7 881 aa11.61□□□□□ -0.55
KDM3A-212ENST00000485171 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
KDM3A-212ENST00000485171 KCNA4P22459 653 aa11.08□□□□□ -0.64
KDM3A-212ENST00000485171 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
KDM3A-212ENST00000485171 NCBP3Q53F19 620 aaKnown RBP10.95□□□□□ -0.66
KDM3A-212ENST00000485171 MSH5O43196 834 aa10.93□□□□□ -0.66
KDM3A-212ENST00000485171 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
KDM3A-212ENST00000485171 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
KDM3A-212ENST00000485171 SLC4A1APQ9BWU0 796 aaKnown RBP10.69□□□□□ -0.7
KDM3A-212ENST00000485171 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
KDM3A-212ENST00000485171 NPM3O75607 178 aaKnown RBP10.65□□□□□ -0.7
KDM3A-212ENST00000485171 MAPK8IP2Q13387 824 aaPredicted RBP10.44□□□□□ -0.74
KDM3A-212ENST00000485171 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
KDM3A-212ENST00000485171 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
KDM3A-212ENST00000485171 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
KDM3A-212ENST00000485171 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
KDM3A-212ENST00000485171 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
KDM3A-212ENST00000485171 HOXD11P31277 338 aaPredicted RBP10.27□□□□□ -0.77
KDM3A-212ENST00000485171 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
KDM3A-212ENST00000485171 ZBTB22O15209 634 aa10.15□□□□□ -0.78
KDM3A-212ENST00000485171 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
KDM3A-212ENST00000485171 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
KDM3A-212ENST00000485171 ZCCHC6Q5VYS8 1495 aaKnown RBP9.9□□□□□ -0.83
KDM3A-212ENST00000485171 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
KDM3A-212ENST00000485171 DCAF1Q9Y4B6 1507 aa9.85□□□□□ -0.83
KDM3A-212ENST00000485171 DCAF8L1A6NGE4 600 aa9.84□□□□□ -0.83
KDM3A-212ENST00000485171 MYO15BQ96JP2 1530 aa9.82□□□□□ -0.84
KDM3A-212ENST00000485171 ABCC9O60706 1549 aa9.79□□□□□ -0.84
KDM3A-212ENST00000485171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.79□□□□□ -0.843e-9■■□□□ 11.8
KDM3A-212ENST00000485171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
KDM3A-212ENST00000485171 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
KDM3A-212ENST00000485171 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
KDM3A-212ENST00000485171 NACADO15069 1562 aa9.69□□□□□ -0.86
KDM3A-212ENST00000485171 APLP2Q06481 763 aa9.62□□□□□ -0.87
KDM3A-212ENST00000485171 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
KDM3A-212ENST00000485171 RB1CC1Q8TDY2 1594 aa9.59□□□□□ -0.87
KDM3A-212ENST00000485171 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
KDM3A-212ENST00000485171 ATF5Q9Y2D1 282 aaPredicted RBP9.47□□□□□ -0.89
KDM3A-212ENST00000485171 FKBP8Q14318 412 aa9.42□□□□□ -0.9
KDM3A-212ENST00000485171 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.9
KDM3A-212ENST00000485171 SCRIBQ14160 1630 aa9.38□□□□□ -0.91
KDM3A-212ENST00000485171 UNC13AQ9UPW8 1703 aa9.34□□□□□ -0.91
KDM3A-212ENST00000485171 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
KDM3A-212ENST00000485171 SHROOM4Q9ULL8 1493 aa9.33□□□□□ -0.92
KDM3A-212ENST00000485171 RNF39Q9H2S5 420 aa9.32□□□□□ -0.92
KDM3A-212ENST00000485171 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
KDM3A-212ENST00000485171 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
KDM3A-212ENST00000485171 POTEDQ86YR6 584 aa9.26□□□□□ -0.93
KDM3A-212ENST00000485171 FBLN2P98095 1184 aa9.24□□□□□ -0.93
KDM3A-212ENST00000485171 TRHP20396 242 aaPredicted RBP9.23□□□□□ -0.93
KDM3A-212ENST00000485171 CAPN15O75808 1086 aa9.22□□□□□ -0.93
KDM3A-212ENST00000485171 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
KDM3A-212ENST00000485171 POLA2Q14181 598 aa9.18□□□□□ -0.94
KDM3A-212ENST00000485171 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
KDM3A-212ENST00000485171 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
KDM3A-212ENST00000485171 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
KDM3A-212ENST00000485171 FBXO3Q9UK99 471 aa9.15□□□□□ -0.94
KDM3A-212ENST00000485171 CECR2Q9BXF3 1484 aa9.13□□□□□ -0.95
KDM3A-212ENST00000485171 MKRN4PQ13434 485 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-212ENST00000485171 BAZ1AQ9NRL2 1556 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-212ENST00000485171 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
KDM3A-212ENST00000485171 RSF1Q96T23 1441 aaPredicted RBP9.09□□□□□ -0.95
KDM3A-212ENST00000485171 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
KDM3A-212ENST00000485171 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
KDM3A-212ENST00000485171 PEG3Q9GZU2 1588 aa9.06□□□□□ -0.96
KDM3A-212ENST00000485171 PROM2Q8N271 834 aa9.04□□□□□ -0.96
KDM3A-212ENST00000485171 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
KDM3A-212ENST00000485171 ABCB7O75027 752 aa9□□□□□ -0.97
KDM3A-212ENST00000485171 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
KDM3A-212ENST00000485171 ATAD2BQ9ULI0 1458 aa8.97□□□□□ -0.97
KDM3A-212ENST00000485171 DSG3P32926 999 aa8.97□□□□□ -0.97
KDM3A-212ENST00000485171 SMARCA2P51531 1590 aa8.97□□□□□ -0.97
KDM3A-212ENST00000485171 WIZO95785 1651 aa8.94□□□□□ -0.98
KDM3A-212ENST00000485171 HMGXB3Q12766 1538 aa8.93□□□□□ -0.98
KDM3A-212ENST00000485171 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
KDM3A-212ENST00000485171 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
KDM3A-212ENST00000485171 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
KDM3A-212ENST00000485171 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.98
KDM3A-212ENST00000485171 SPDYE6P0CI01 402 aa8.9□□□□□ -0.98
KDM3A-212ENST00000485171 VASPP50552 380 aaPredicted RBP8.9□□□□□ -0.98
KDM3A-212ENST00000485171 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
KDM3A-212ENST00000485171 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
KDM3A-212ENST00000485171 BAZ1BQ9UIG0 1483 aaKnown RBP8.86□□□□□ -0.99
KDM3A-212ENST00000485171 CACNB1Q02641 598 aaPredicted RBP8.86□□□□□ -0.99
KDM3A-212ENST00000485171 STAG3Q9UJ98 1225 aa8.85□□□□□ -0.99
KDM3A-212ENST00000485171 SLC24A1O60721 1099 aa8.83□□□□□ -1
KDM3A-212ENST00000485171 SSUH2Q9Y2M2 353 aa8.81□□□□□ -1
KDM3A-212ENST00000485171 OSCARQ8IYS5 282 aa8.8□□□□□ -1
KDM3A-212ENST00000485171 CCDC88BA6NC98 1476 aa8.8□□□□□ -1
KDM3A-212ENST00000485171 IFNLR1Q8IU57 520 aaPredicted RBP8.76□□□□□ -1.01
KDM3A-212ENST00000485171 CFTRP13569 1480 aa8.71□□□□□ -1.01
KDM3A-212ENST00000485171 PLEKHG5O94827 1062 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms