RNA–Protein interactions for RNA: ENST00000484840.5

GTF2I-209, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-209ENST00000484840 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
GTF2I-209ENST00000484840 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
GTF2I-209ENST00000484840 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
GTF2I-209ENST00000484840 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
GTF2I-209ENST00000484840 FOXD1Q16676 465 aa23.1■■□□□ 1.29
GTF2I-209ENST00000484840 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
GTF2I-209ENST00000484840 MSH5O43196 834 aa21.82■■□□□ 1.08
GTF2I-209ENST00000484840 PIAS4Q8N2W9 510 aaPredicted RBP21.35■■□□□ 1.01
GTF2I-209ENST00000484840 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
GTF2I-209ENST00000484840 ADRA2BP18089 450 aa20.94■□□□□ 0.94
GTF2I-209ENST00000484840 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
GTF2I-209ENST00000484840 MAPK8IP2Q13387 824 aaPredicted RBP19.48■□□□□ 0.71
GTF2I-209ENST00000484840 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
GTF2I-209ENST00000484840 CACNB1Q02641 598 aaPredicted RBP19.18■□□□□ 0.66
GTF2I-209ENST00000484840 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
GTF2I-209ENST00000484840 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
GTF2I-209ENST00000484840 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
GTF2I-209ENST00000484840 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
GTF2I-209ENST00000484840 C1QBPQ07021 282 aaKnown RBP18.27■□□□□ 0.52
GTF2I-209ENST00000484840 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
GTF2I-209ENST00000484840 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
GTF2I-209ENST00000484840 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
GTF2I-209ENST00000484840 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
GTF2I-209ENST00000484840 POTEHQ6S545 545 aa17.54■□□□□ 0.4
GTF2I-209ENST00000484840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.41e-12■■■□□ 14.8
GTF2I-209ENST00000484840 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
GTF2I-209ENST00000484840 DSG3P32926 999 aa17.18■□□□□ 0.34
GTF2I-209ENST00000484840 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
GTF2I-209ENST00000484840 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
GTF2I-209ENST00000484840 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
GTF2I-209ENST00000484840 CAPN15O75808 1086 aa17.05■□□□□ 0.32
GTF2I-209ENST00000484840 KCNA4P22459 653 aa16.79■□□□□ 0.28
GTF2I-209ENST00000484840 ABCB7O75027 752 aa16.62■□□□□ 0.25
GTF2I-209ENST00000484840 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
GTF2I-209ENST00000484840 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
GTF2I-209ENST00000484840 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
GTF2I-209ENST00000484840 APLP2Q06481 763 aa16.46■□□□□ 0.23
GTF2I-209ENST00000484840 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
GTF2I-209ENST00000484840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
GTF2I-209ENST00000484840 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
GTF2I-209ENST00000484840 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
GTF2I-209ENST00000484840 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
GTF2I-209ENST00000484840 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
GTF2I-209ENST00000484840 POLA2Q14181 598 aa16.03■□□□□ 0.16
GTF2I-209ENST00000484840 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
GTF2I-209ENST00000484840 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
GTF2I-209ENST00000484840 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
GTF2I-209ENST00000484840 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
GTF2I-209ENST00000484840 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
GTF2I-209ENST00000484840 HAX1O00165 279 aa15.67■□□□□ 0.1
GTF2I-209ENST00000484840 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.082e-6■□□□□ 9.2
GTF2I-209ENST00000484840 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
GTF2I-209ENST00000484840 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
GTF2I-209ENST00000484840 PITPNM1O00562 1244 aa15.56■□□□□ 0.08
GTF2I-209ENST00000484840 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
GTF2I-209ENST00000484840 EVX2Q03828 476 aa15.51■□□□□ 0.07
GTF2I-209ENST00000484840 ZBTB22O15209 634 aa15.47■□□□□ 0.07
GTF2I-209ENST00000484840 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
GTF2I-209ENST00000484840 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
GTF2I-209ENST00000484840 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
GTF2I-209ENST00000484840 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
GTF2I-209ENST00000484840 C19orf67A6NJJ6 358 aa15.11■□□□□ 0.01
GTF2I-209ENST00000484840 LHX8Q68G74 356 aa15.09■□□□□ 0.01
GTF2I-209ENST00000484840 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
GTF2I-209ENST00000484840 SPDYE6P0CI01 402 aa15.08■□□□□ 0
GTF2I-209ENST00000484840 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
GTF2I-209ENST00000484840 GABBR2O75899 941 aa15.07■□□□□ 0
GTF2I-209ENST00000484840 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
GTF2I-209ENST00000484840 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
GTF2I-209ENST00000484840 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
GTF2I-209ENST00000484840 FBLN2P98095 1184 aa14.89□□□□□ -0.03
GTF2I-209ENST00000484840 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
GTF2I-209ENST00000484840 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
GTF2I-209ENST00000484840 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
GTF2I-209ENST00000484840 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
GTF2I-209ENST00000484840 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
GTF2I-209ENST00000484840 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
GTF2I-209ENST00000484840 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
GTF2I-209ENST00000484840 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
GTF2I-209ENST00000484840 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
GTF2I-209ENST00000484840 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
GTF2I-209ENST00000484840 CLCN6P51797 869 aa14.52□□□□□ -0.09
GTF2I-209ENST00000484840 DCBLD2Q96PD2 775 aa14.45□□□□□ -0.1
GTF2I-209ENST00000484840 OTUD5Q96G74 571 aa14.36□□□□□ -0.11
GTF2I-209ENST00000484840 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
GTF2I-209ENST00000484840 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
GTF2I-209ENST00000484840 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
GTF2I-209ENST00000484840 GALR2O43603 387 aaPredicted RBP14.25□□□□□ -0.13
GTF2I-209ENST00000484840 POTEMA6NI47 508 aa14.23□□□□□ -0.13
GTF2I-209ENST00000484840 POTEGQ6S5H5 508 aa14.18□□□□□ -0.14
GTF2I-209ENST00000484840 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
GTF2I-209ENST00000484840 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
GTF2I-209ENST00000484840 PHF12Q96QT6 1004 aa14.04□□□□□ -0.16
GTF2I-209ENST00000484840 PCDH10Q9P2E7 1040 aa14.03□□□□□ -0.16
GTF2I-209ENST00000484840 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
GTF2I-209ENST00000484840 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
GTF2I-209ENST00000484840 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
GTF2I-209ENST00000484840 LCE2DQ5TA82 110 aaPredicted RBP13.91□□□□□ -0.18
GTF2I-209ENST00000484840 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
GTF2I-209ENST00000484840 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 314.3 ms