RNA–Protein interactions for RNA: ENST00000483350.1

RBM6-217, Transcript of RNA binding motif protein 6, humanhuman

TSL 3

Gene RBM6, Length 988 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM6-217ENST00000483350 NISCHQ9Y2I1 1504 aa34.62■■■■□ 3.13
RBM6-217ENST00000483350 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
RBM6-217ENST00000483350 ABCC9O60706 1549 aa30.49■■■□□ 2.47
RBM6-217ENST00000483350 DCAF8L2P0C7V8 631 aa29.19■■■□□ 2.26
RBM6-217ENST00000483350 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
RBM6-217ENST00000483350 NACADO15069 1562 aa29.02■■■□□ 2.24
RBM6-217ENST00000483350 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
RBM6-217ENST00000483350 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
RBM6-217ENST00000483350 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
RBM6-217ENST00000483350 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
RBM6-217ENST00000483350 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
RBM6-217ENST00000483350 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
RBM6-217ENST00000483350 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
RBM6-217ENST00000483350 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
RBM6-217ENST00000483350 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
RBM6-217ENST00000483350 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
RBM6-217ENST00000483350 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
RBM6-217ENST00000483350 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
RBM6-217ENST00000483350 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
RBM6-217ENST00000483350 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
RBM6-217ENST00000483350 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
RBM6-217ENST00000483350 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
RBM6-217ENST00000483350 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
RBM6-217ENST00000483350 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
RBM6-217ENST00000483350 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
RBM6-217ENST00000483350 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
RBM6-217ENST00000483350 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
RBM6-217ENST00000483350 WIZO95785 1651 aa26.44■■□□□ 1.82
RBM6-217ENST00000483350 RSF1Q96T23 1441 aaPredicted RBP26.34■■□□□ 1.81
RBM6-217ENST00000483350 NESP48681 1621 aa26.34■■□□□ 1.81
RBM6-217ENST00000483350 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
RBM6-217ENST00000483350 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
RBM6-217ENST00000483350 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
RBM6-217ENST00000483350 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
RBM6-217ENST00000483350 CUX2O14529 1486 aa25.97■■□□□ 1.75
RBM6-217ENST00000483350 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
RBM6-217ENST00000483350 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
RBM6-217ENST00000483350 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
RBM6-217ENST00000483350 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
RBM6-217ENST00000483350 CFTRP13569 1480 aa25.83■■□□□ 1.73
RBM6-217ENST00000483350 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
RBM6-217ENST00000483350 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
RBM6-217ENST00000483350 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
RBM6-217ENST00000483350 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
RBM6-217ENST00000483350 WDR62O43379 1518 aa25.63■■□□□ 1.69
RBM6-217ENST00000483350 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
RBM6-217ENST00000483350 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
RBM6-217ENST00000483350 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.67
RBM6-217ENST00000483350 TOPBP1Q92547 1522 aa25.32■■□□□ 1.64
RBM6-217ENST00000483350 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
RBM6-217ENST00000483350 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
RBM6-217ENST00000483350 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
RBM6-217ENST00000483350 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
RBM6-217ENST00000483350 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
RBM6-217ENST00000483350 CUX1P39880 1505 aa25.07■■□□□ 1.6
RBM6-217ENST00000483350 TARBP1Q13395 1621 aaKnown RBP25.05■■□□□ 1.6
RBM6-217ENST00000483350 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
RBM6-217ENST00000483350 SOGA1O94964 1423 aa25.02■■□□□ 1.6
RBM6-217ENST00000483350 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
RBM6-217ENST00000483350 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.595e-6■■□□□ 14.3
RBM6-217ENST00000483350 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
RBM6-217ENST00000483350 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
RBM6-217ENST00000483350 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
RBM6-217ENST00000483350 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
RBM6-217ENST00000483350 FBLN2P98095 1184 aa24.8■■□□□ 1.56
RBM6-217ENST00000483350 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
RBM6-217ENST00000483350 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
RBM6-217ENST00000483350 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
RBM6-217ENST00000483350 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
RBM6-217ENST00000483350 CHD1O14646 1710 aa24.75■■□□□ 1.55
RBM6-217ENST00000483350 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
RBM6-217ENST00000483350 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
RBM6-217ENST00000483350 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
RBM6-217ENST00000483350 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
RBM6-217ENST00000483350 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
RBM6-217ENST00000483350 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
RBM6-217ENST00000483350 PBRM1Q86U86 1689 aa24.64■■□□□ 1.53
RBM6-217ENST00000483350 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
RBM6-217ENST00000483350 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
RBM6-217ENST00000483350 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
RBM6-217ENST00000483350 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
RBM6-217ENST00000483350 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
RBM6-217ENST00000483350 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
RBM6-217ENST00000483350 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
RBM6-217ENST00000483350 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
RBM6-217ENST00000483350 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
RBM6-217ENST00000483350 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
RBM6-217ENST00000483350 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
RBM6-217ENST00000483350 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
RBM6-217ENST00000483350 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
RBM6-217ENST00000483350 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
RBM6-217ENST00000483350 CEP170Q5SW79 1584 aa24.3■■□□□ 1.48
RBM6-217ENST00000483350 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
RBM6-217ENST00000483350 IGF1RP08069 1367 aa24.28■■□□□ 1.48
RBM6-217ENST00000483350 NUP160Q12769 1436 aa24.27■■□□□ 1.48
RBM6-217ENST00000483350 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
RBM6-217ENST00000483350 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
RBM6-217ENST00000483350 CUL7Q14999 1698 aa24.13■■□□□ 1.45
RBM6-217ENST00000483350 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
RBM6-217ENST00000483350 JPH4Q96JJ6 628 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms