RNA–Protein interactions for RNA: ENST00000483350.1

RBM6-217, Transcript of RNA binding motif protein 6, humanhuman

TSL 3

Gene RBM6, Length 988 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM6-217ENST00000483350 QKIQ96PU8 341 aaKnown RBP eCLIP14.08□□□□□ -0.161e-19■■■■□ 25.2
RBM6-217ENST00000483350 TARDBPQ13148 414 aaKnown RBP eCLIP14.13□□□□□ -0.152e-19■■■■■ 68.6
RBM6-217ENST00000483350 ILF3Q12906 894 aaKnown RBP eCLIP14.03□□□□□ -0.163e-16■■■■□ 20.4
RBM6-217ENST00000483350 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.191e-11■□□□□ 8.3
RBM6-217ENST00000483350 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.393e-11■■■■■ 56.6
RBM6-217ENST00000483350 EIF3HO15372 352 aaKnown RBP eCLIP13.48□□□□□ -0.252e-10■■□□□ 11.9
RBM6-217ENST00000483350 HNRNPKP61978 463 aaKnown RBP eCLIP14.19□□□□□ -0.142e-10■■■■□ 19.3
RBM6-217ENST00000483350 TIA1P31483 386 aaKnown RBP eCLIP13.04□□□□□ -0.323e-10■■■■■ 29.7
RBM6-217ENST00000483350 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.338e-10■□□□□ 9.7
RBM6-217ENST00000483350 PCBP2Q15366 365 aaKnown RBP eCLIP13.26□□□□□ -0.291e-9■■■■■ 49.8
RBM6-217ENST00000483350 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.698e-9■■■■□ 24.3
RBM6-217ENST00000483350 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.752e-8■■■■□ 24.1
RBM6-217ENST00000483350 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.01□□□□□ -0.334e-8■■□□□ 11.7
RBM6-217ENST00000483350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.17■□□□□ 0.665e-8■■□□□ 12.5
RBM6-217ENST00000483350 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.36e-8■■□□□ 11.5
RBM6-217ENST00000483350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.071e-7■■■□□ 18
RBM6-217ENST00000483350 HNRNPCP07910 306 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■■■□ 22.7
RBM6-217ENST00000483350 ZNF622Q969S3 477 aaKnown RBP eCLIP18.41■□□□□ 0.541e-7■■□□□ 13.1
RBM6-217ENST00000483350 GTF2F1P35269 517 aaKnown RBP eCLIP15.69■□□□□ 0.11e-7■■■■■ 30.9
RBM6-217ENST00000483350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.42□□□□□ -0.12e-7■■□□□ 11.7
RBM6-217ENST00000483350 DKC1O60832 514 aaKnown RBP eCLIP15.82■□□□□ 0.122e-7■■□□□ 13.6
RBM6-217ENST00000483350 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■□□□□ 10.7
RBM6-217ENST00000483350 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.362e-7■■■■■ 27.7
RBM6-217ENST00000483350 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.183e-7■■■□□ 17.8
RBM6-217ENST00000483350 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.05□□□□□ -0.325e-7■□□□□ 9
RBM6-217ENST00000483350 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.071e-6■□□□□ 9.9
RBM6-217ENST00000483350 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■■■ 85.6
RBM6-217ENST00000483350 TIAL1Q01085 375 aaKnown RBP eCLIP13.6□□□□□ -0.233e-6■■■■□ 20.6
RBM6-217ENST00000483350 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.333e-6■□□□□ 9
RBM6-217ENST00000483350 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.53e-6■■□□□ 11.5
RBM6-217ENST00000483350 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.114e-6■■■■□ 25.4
RBM6-217ENST00000483350 SF3B1O75533 1304 aaKnown RBP eCLIP15.44■□□□□ 0.064e-6■■■■■ 89.2
RBM6-217ENST00000483350 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.595e-6■■□□□ 14.3
RBM6-217ENST00000483350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.776e-6■□□□□ 8.5
RBM6-217ENST00000483350 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.78□□□□□ -0.29e-6■■□□□ 12.4
Retrieved 35 of 35 RNA–protein pairs in 7.6 ms