RNA–Protein interactions for RNA: ENST00000482530.1

SCMH1-214, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5

Gene SCMH1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-214ENST00000482530 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
SCMH1-214ENST00000482530 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
SCMH1-214ENST00000482530 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
SCMH1-214ENST00000482530 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
SCMH1-214ENST00000482530 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
SCMH1-214ENST00000482530 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
SCMH1-214ENST00000482530 ADRA2BP18089 450 aa12.84□□□□□ -0.35
SCMH1-214ENST00000482530 FOXD1Q16676 465 aa12.79□□□□□ -0.36
SCMH1-214ENST00000482530 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
SCMH1-214ENST00000482530 KCNA4P22459 653 aa12.41□□□□□ -0.42
SCMH1-214ENST00000482530 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
SCMH1-214ENST00000482530 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
SCMH1-214ENST00000482530 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
SCMH1-214ENST00000482530 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
SCMH1-214ENST00000482530 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
SCMH1-214ENST00000482530 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
SCMH1-214ENST00000482530 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
SCMH1-214ENST00000482530 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
SCMH1-214ENST00000482530 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
SCMH1-214ENST00000482530 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
SCMH1-214ENST00000482530 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
SCMH1-214ENST00000482530 ZBTB22O15209 634 aa11.47□□□□□ -0.57
SCMH1-214ENST00000482530 MSH5O43196 834 aa11.47□□□□□ -0.57
SCMH1-214ENST00000482530 ABCC9O60706 1549 aa11.45□□□□□ -0.58
SCMH1-214ENST00000482530 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
SCMH1-214ENST00000482530 ZCCHC6Q5VYS8 1495 aaKnown RBP11.27□□□□□ -0.6
SCMH1-214ENST00000482530 DCAF1Q9Y4B6 1507 aa11.23□□□□□ -0.61
SCMH1-214ENST00000482530 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
SCMH1-214ENST00000482530 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
SCMH1-214ENST00000482530 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
SCMH1-214ENST00000482530 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
SCMH1-214ENST00000482530 NACADO15069 1562 aa11.19□□□□□ -0.62
SCMH1-214ENST00000482530 RB1CC1Q8TDY2 1594 aa11.12□□□□□ -0.63
SCMH1-214ENST00000482530 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
SCMH1-214ENST00000482530 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
SCMH1-214ENST00000482530 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
SCMH1-214ENST00000482530 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
SCMH1-214ENST00000482530 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCMH1-214ENST00000482530 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
SCMH1-214ENST00000482530 MYCNP04198 464 aaPredicted RBP10.76□□□□□ -0.69
SCMH1-214ENST00000482530 ATXN8OSP0DMR3 200 aa10.71□□□□□ -0.69
SCMH1-214ENST00000482530 UNC13AQ9UPW8 1703 aa10.69□□□□□ -0.7
SCMH1-214ENST00000482530 BICRAQ9NZM4 1560 aa10.68□□□□□ -0.7
SCMH1-214ENST00000482530 DCAF8L1A6NGE4 600 aa10.63□□□□□ -0.71
SCMH1-214ENST00000482530 FKBP8Q14318 412 aa10.6□□□□□ -0.71
SCMH1-214ENST00000482530 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
SCMH1-214ENST00000482530 ATF5Q9Y2D1 282 aaPredicted RBP10.59□□□□□ -0.71
SCMH1-214ENST00000482530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.725e-7■□□□□ 9.9
SCMH1-214ENST00000482530 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
SCMH1-214ENST00000482530 BAZ1AQ9NRL2 1556 aaPredicted RBP10.48□□□□□ -0.73
SCMH1-214ENST00000482530 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
SCMH1-214ENST00000482530 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
SCMH1-214ENST00000482530 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
SCMH1-214ENST00000482530 RSF1Q96T23 1441 aaPredicted RBP10.43□□□□□ -0.74
SCMH1-214ENST00000482530 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
SCMH1-214ENST00000482530 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
SCMH1-214ENST00000482530 SAMD1Q6SPF0 538 aaPredicted RBP10.39□□□□□ -0.75
SCMH1-214ENST00000482530 SMARCA4P51532 1647 aa10.39□□□□□ -0.75
SCMH1-214ENST00000482530 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
SCMH1-214ENST00000482530 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
SCMH1-214ENST00000482530 SMARCA2P51531 1590 aa10.36□□□□□ -0.75
SCMH1-214ENST00000482530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
SCMH1-214ENST00000482530 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
SCMH1-214ENST00000482530 SLC24A1O60721 1099 aa10.33□□□□□ -0.76
SCMH1-214ENST00000482530 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
SCMH1-214ENST00000482530 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
SCMH1-214ENST00000482530 BAZ1BQ9UIG0 1483 aaKnown RBP10.29□□□□□ -0.76
SCMH1-214ENST00000482530 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
SCMH1-214ENST00000482530 WIZO95785 1651 aa10.26□□□□□ -0.77
SCMH1-214ENST00000482530 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
SCMH1-214ENST00000482530 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
SCMH1-214ENST00000482530 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
SCMH1-214ENST00000482530 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
SCMH1-214ENST00000482530 CADPSQ9ULU8 1353 aa10.11□□□□□ -0.79
SCMH1-214ENST00000482530 APLP2Q06481 763 aa10.1□□□□□ -0.79
SCMH1-214ENST00000482530 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
SCMH1-214ENST00000482530 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
SCMH1-214ENST00000482530 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
SCMH1-214ENST00000482530 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
SCMH1-214ENST00000482530 CFTRP13569 1480 aa10.03□□□□□ -0.8
SCMH1-214ENST00000482530 POLA2Q14181 598 aa9.99□□□□□ -0.81
SCMH1-214ENST00000482530 LAMC3Q9Y6N6 1575 aa9.98□□□□□ -0.81
SCMH1-214ENST00000482530 FBXO3Q9UK99 471 aa9.97□□□□□ -0.81
SCMH1-214ENST00000482530 PROM2Q8N271 834 aa9.96□□□□□ -0.82
SCMH1-214ENST00000482530 FBLN2P98095 1184 aa9.95□□□□□ -0.82
SCMH1-214ENST00000482530 CAPN15O75808 1086 aa9.94□□□□□ -0.82
SCMH1-214ENST00000482530 RNF39Q9H2S5 420 aa9.94□□□□□ -0.82
SCMH1-214ENST00000482530 NESP48681 1621 aa9.93□□□□□ -0.82
SCMH1-214ENST00000482530 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
SCMH1-214ENST00000482530 FANCD2Q9BXW9 1451 aa9.92□□□□□ -0.82
SCMH1-214ENST00000482530 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
SCMH1-214ENST00000482530 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
SCMH1-214ENST00000482530 ABCC8Q09428 1581 aa9.89□□□□□ -0.83
SCMH1-214ENST00000482530 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
SCMH1-214ENST00000482530 WRNQ14191 1432 aaPredicted RBP eCLIP9.86□□□□□ -0.83
SCMH1-214ENST00000482530 IFNLR1Q8IU57 520 aaPredicted RBP9.86□□□□□ -0.83
SCMH1-214ENST00000482530 ABCB7O75027 752 aa9.85□□□□□ -0.83
SCMH1-214ENST00000482530 MRC2Q9UBG0 1479 aa9.81□□□□□ -0.84
SCMH1-214ENST00000482530 PRDM2Q13029 1718 aa9.8□□□□□ -0.84
SCMH1-214ENST00000482530 C1QBPQ07021 282 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms