RNA–Protein interactions for RNA: ENST00000482479.1

TFRC-213, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-213ENST00000482479 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
TFRC-213ENST00000482479 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
TFRC-213ENST00000482479 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
TFRC-213ENST00000482479 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
TFRC-213ENST00000482479 FOXD1Q16676 465 aa21.63■■□□□ 1.05
TFRC-213ENST00000482479 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
TFRC-213ENST00000482479 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
TFRC-213ENST00000482479 ADRA2BP18089 450 aa20.45■□□□□ 0.86
TFRC-213ENST00000482479 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
TFRC-213ENST00000482479 MSH5O43196 834 aa20.11■□□□□ 0.81
TFRC-213ENST00000482479 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
TFRC-213ENST00000482479 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
TFRC-213ENST00000482479 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
TFRC-213ENST00000482479 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
TFRC-213ENST00000482479 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
TFRC-213ENST00000482479 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
TFRC-213ENST00000482479 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
TFRC-213ENST00000482479 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
TFRC-213ENST00000482479 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
TFRC-213ENST00000482479 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
TFRC-213ENST00000482479 KCNA4P22459 653 aa17.74■□□□□ 0.43
TFRC-213ENST00000482479 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
TFRC-213ENST00000482479 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
TFRC-213ENST00000482479 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
TFRC-213ENST00000482479 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
TFRC-213ENST00000482479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
TFRC-213ENST00000482479 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
TFRC-213ENST00000482479 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
TFRC-213ENST00000482479 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
TFRC-213ENST00000482479 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
TFRC-213ENST00000482479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
TFRC-213ENST00000482479 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
TFRC-213ENST00000482479 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
TFRC-213ENST00000482479 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
TFRC-213ENST00000482479 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
TFRC-213ENST00000482479 CAPN15O75808 1086 aa16.38■□□□□ 0.21
TFRC-213ENST00000482479 APLP2Q06481 763 aa16.37■□□□□ 0.21
TFRC-213ENST00000482479 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
TFRC-213ENST00000482479 ZBTB22O15209 634 aa16.32■□□□□ 0.2
TFRC-213ENST00000482479 DSG3P32926 999 aa16.22■□□□□ 0.19
TFRC-213ENST00000482479 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
TFRC-213ENST00000482479 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
TFRC-213ENST00000482479 ABCB7O75027 752 aa16.03■□□□□ 0.16
TFRC-213ENST00000482479 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
TFRC-213ENST00000482479 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
TFRC-213ENST00000482479 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
TFRC-213ENST00000482479 POLA2Q14181 598 aa15.86■□□□□ 0.13
TFRC-213ENST00000482479 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
TFRC-213ENST00000482479 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
TFRC-213ENST00000482479 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
TFRC-213ENST00000482479 POTEHQ6S545 545 aa15.45■□□□□ 0.06
TFRC-213ENST00000482479 FBLN2P98095 1184 aa15.34■□□□□ 0.05
TFRC-213ENST00000482479 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
TFRC-213ENST00000482479 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
TFRC-213ENST00000482479 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
TFRC-213ENST00000482479 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
TFRC-213ENST00000482479 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
TFRC-213ENST00000482479 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
TFRC-213ENST00000482479 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
TFRC-213ENST00000482479 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
TFRC-213ENST00000482479 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
TFRC-213ENST00000482479 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
TFRC-213ENST00000482479 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
TFRC-213ENST00000482479 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
TFRC-213ENST00000482479 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
TFRC-213ENST00000482479 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
TFRC-213ENST00000482479 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
TFRC-213ENST00000482479 PIP4P2Q8N4L2 257 aa14.7□□□□□ -0.06
TFRC-213ENST00000482479 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
TFRC-213ENST00000482479 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
TFRC-213ENST00000482479 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
TFRC-213ENST00000482479 PROM2Q8N271 834 aa14.49□□□□□ -0.09
TFRC-213ENST00000482479 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
TFRC-213ENST00000482479 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
TFRC-213ENST00000482479 FKBP8Q14318 412 aa14.38□□□□□ -0.11
TFRC-213ENST00000482479 HAX1O00165 279 aa14.31□□□□□ -0.12
TFRC-213ENST00000482479 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
TFRC-213ENST00000482479 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
TFRC-213ENST00000482479 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
TFRC-213ENST00000482479 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
TFRC-213ENST00000482479 EVX2Q03828 476 aa14.18□□□□□ -0.14
TFRC-213ENST00000482479 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
TFRC-213ENST00000482479 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
TFRC-213ENST00000482479 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
TFRC-213ENST00000482479 MIER1Q8N108 512 aa14.01□□□□□ -0.17
TFRC-213ENST00000482479 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
TFRC-213ENST00000482479 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
TFRC-213ENST00000482479 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
TFRC-213ENST00000482479 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
TFRC-213ENST00000482479 GABBR2O75899 941 aa13.89□□□□□ -0.19
TFRC-213ENST00000482479 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
TFRC-213ENST00000482479 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
TFRC-213ENST00000482479 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
TFRC-213ENST00000482479 CLCN6P51797 869 aa13.83□□□□□ -0.2
TFRC-213ENST00000482479 VASPP50552 380 aaPredicted RBP13.81□□□□□ -0.2
TFRC-213ENST00000482479 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
TFRC-213ENST00000482479 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
TFRC-213ENST00000482479 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
TFRC-213ENST00000482479 NUBP1P53384 320 aa13.72□□□□□ -0.21
TFRC-213ENST00000482479 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms