RNA–Protein interactions for RNA: ENST00000482378.6

TMEM198B-203, Transcript of transmembrane protein 198B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene TMEM198B, Length 2,230 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM198B-203ENST00000482378 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
TMEM198B-203ENST00000482378 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
TMEM198B-203ENST00000482378 PELP1Q8IZL8 1130 aaKnown RBP29.54■■■□□ 2.32
TMEM198B-203ENST00000482378 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
TMEM198B-203ENST00000482378 MYT1Q01538 1121 aa28.87■■■□□ 2.21
TMEM198B-203ENST00000482378 ABCC9O60706 1549 aa28.72■■■□□ 2.19
TMEM198B-203ENST00000482378 HRCP23327 699 aa28.6■■■□□ 2.17
TMEM198B-203ENST00000482378 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
TMEM198B-203ENST00000482378 DCAF8L2P0C7V8 631 aa28.31■■■□□ 2.12
TMEM198B-203ENST00000482378 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
TMEM198B-203ENST00000482378 NACADO15069 1562 aa28.11■■■□□ 2.09
TMEM198B-203ENST00000482378 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.06
TMEM198B-203ENST00000482378 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
TMEM198B-203ENST00000482378 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
TMEM198B-203ENST00000482378 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
TMEM198B-203ENST00000482378 PPARGC1BQ86YN6 1023 aaKnown RBP27.52■■■□□ 2
TMEM198B-203ENST00000482378 SCAF1Q9H7N4 1312 aaKnown RBP27.48■■□□□ 1.99
TMEM198B-203ENST00000482378 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
TMEM198B-203ENST00000482378 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
TMEM198B-203ENST00000482378 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.91
TMEM198B-203ENST00000482378 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
TMEM198B-203ENST00000482378 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
TMEM198B-203ENST00000482378 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
TMEM198B-203ENST00000482378 ZEB1P37275 1124 aaPredicted RBP26.7■■□□□ 1.87
TMEM198B-203ENST00000482378 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
TMEM198B-203ENST00000482378 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
TMEM198B-203ENST00000482378 ACIN1Q9UKV3 1341 aaKnown RBP26.62■■□□□ 1.85
TMEM198B-203ENST00000482378 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
TMEM198B-203ENST00000482378 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
TMEM198B-203ENST00000482378 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
TMEM198B-203ENST00000482378 WIZO95785 1651 aa26.35■■□□□ 1.81
TMEM198B-203ENST00000482378 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
TMEM198B-203ENST00000482378 BCL11AQ9H165 835 aa26.33■■□□□ 1.81
TMEM198B-203ENST00000482378 CENPBP07199 599 aaPredicted RBP26.32■■□□□ 1.8
TMEM198B-203ENST00000482378 NEUROD1Q13562 356 aa26.32■■□□□ 1.8
TMEM198B-203ENST00000482378 GTF3C3Q9Y5Q9 886 aa26.29■■□□□ 1.8
TMEM198B-203ENST00000482378 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
TMEM198B-203ENST00000482378 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
TMEM198B-203ENST00000482378 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
TMEM198B-203ENST00000482378 SMARCA2P51531 1590 aa26.14■■□□□ 1.77
TMEM198B-203ENST00000482378 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
TMEM198B-203ENST00000482378 PRKCSHP14314 528 aaPredicted RBP26.13■■□□□ 1.77
TMEM198B-203ENST00000482378 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
TMEM198B-203ENST00000482378 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
TMEM198B-203ENST00000482378 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
TMEM198B-203ENST00000482378 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
TMEM198B-203ENST00000482378 ERICH6Q7L0X2 663 aa25.88■■□□□ 1.73
TMEM198B-203ENST00000482378 NCAPD3P42695 1498 aa25.87■■□□□ 1.73
TMEM198B-203ENST00000482378 CC2D2AQ9P2K1 1620 aa25.86■■□□□ 1.73
TMEM198B-203ENST00000482378 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
TMEM198B-203ENST00000482378 ANP32EQ9BTT0 268 aa25.75■■□□□ 1.71
TMEM198B-203ENST00000482378 APLP2Q06481 763 aa25.61■■□□□ 1.69
TMEM198B-203ENST00000482378 DIEXFQ68CQ4 756 aaKnown RBP25.5■■□□□ 1.67
TMEM198B-203ENST00000482378 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.65
TMEM198B-203ENST00000482378 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
TMEM198B-203ENST00000482378 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
TMEM198B-203ENST00000482378 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
TMEM198B-203ENST00000482378 CFTRP13569 1480 aa25.26■■□□□ 1.63
TMEM198B-203ENST00000482378 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
TMEM198B-203ENST00000482378 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
TMEM198B-203ENST00000482378 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
TMEM198B-203ENST00000482378 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
TMEM198B-203ENST00000482378 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
TMEM198B-203ENST00000482378 TSHZ2Q9NRE2 1034 aa25.06■■□□□ 1.6
TMEM198B-203ENST00000482378 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
TMEM198B-203ENST00000482378 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
TMEM198B-203ENST00000482378 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
TMEM198B-203ENST00000482378 NESP48681 1621 aa24.92■■□□□ 1.58
TMEM198B-203ENST00000482378 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
TMEM198B-203ENST00000482378 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
TMEM198B-203ENST00000482378 YTHDC1Q96MU7 727 aaKnown RBP24.89■■□□□ 1.57
TMEM198B-203ENST00000482378 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
TMEM198B-203ENST00000482378 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
TMEM198B-203ENST00000482378 ZNF316A6NFI3 1004 aaPredicted RBP24.85■■□□□ 1.57
TMEM198B-203ENST00000482378 CUX1P39880 1505 aa24.84■■□□□ 1.57
TMEM198B-203ENST00000482378 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
TMEM198B-203ENST00000482378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
TMEM198B-203ENST00000482378 EEA1Q15075 1411 aa24.77■■□□□ 1.56
TMEM198B-203ENST00000482378 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
TMEM198B-203ENST00000482378 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
TMEM198B-203ENST00000482378 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
TMEM198B-203ENST00000482378 MIER1Q8N108 512 aa24.66■■□□□ 1.54
TMEM198B-203ENST00000482378 SOGA1O94964 1423 aa24.66■■□□□ 1.54
TMEM198B-203ENST00000482378 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
TMEM198B-203ENST00000482378 MYT1LQ9UL68 1186 aa24.61■■□□□ 1.53
TMEM198B-203ENST00000482378 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
TMEM198B-203ENST00000482378 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
TMEM198B-203ENST00000482378 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
TMEM198B-203ENST00000482378 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
TMEM198B-203ENST00000482378 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
TMEM198B-203ENST00000482378 KIF27Q86VH2 1401 aa24.5■■□□□ 1.51
TMEM198B-203ENST00000482378 CUX2O14529 1486 aa24.45■■□□□ 1.5
TMEM198B-203ENST00000482378 KIF21BO75037 1637 aa24.44■■□□□ 1.5
TMEM198B-203ENST00000482378 ANO8Q9HCE9 1232 aaPredicted RBP24.43■■□□□ 1.5
TMEM198B-203ENST00000482378 WDR62O43379 1518 aa24.42■■□□□ 1.5
TMEM198B-203ENST00000482378 UBE2Q2Q8WVN8 375 aa24.42■■□□□ 1.5
TMEM198B-203ENST00000482378 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
TMEM198B-203ENST00000482378 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
TMEM198B-203ENST00000482378 ERICH6BQ5W0A0 696 aa24.38■■□□□ 1.49
TMEM198B-203ENST00000482378 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms