RNA–Protein interactions for RNA: ENST00000481582.5

ABCC13-205, Transcript of ATP binding cassette subfamily C member 13 (pseudogene), humanhuman

TSL 1 (best)

Gene ABCC13, Length 4,080 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC13-205ENST00000481582 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
ABCC13-205ENST00000481582 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
ABCC13-205ENST00000481582 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
ABCC13-205ENST00000481582 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
ABCC13-205ENST00000481582 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
ABCC13-205ENST00000481582 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
ABCC13-205ENST00000481582 ABCC9O60706 1549 aa16.06■□□□□ 0.16
ABCC13-205ENST00000481582 TTBK1Q5TCY1 1321 aaPredicted RBP15.98■□□□□ 0.15
ABCC13-205ENST00000481582 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
ABCC13-205ENST00000481582 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
ABCC13-205ENST00000481582 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
ABCC13-205ENST00000481582 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
ABCC13-205ENST00000481582 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
ABCC13-205ENST00000481582 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
ABCC13-205ENST00000481582 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
ABCC13-205ENST00000481582 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
ABCC13-205ENST00000481582 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
ABCC13-205ENST00000481582 SCRIBQ14160 1630 aa15.52■□□□□ 0.07
ABCC13-205ENST00000481582 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.07
ABCC13-205ENST00000481582 APLP2Q06481 763 aa15.41■□□□□ 0.06
ABCC13-205ENST00000481582 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.04
ABCC13-205ENST00000481582 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
ABCC13-205ENST00000481582 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
ABCC13-205ENST00000481582 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
ABCC13-205ENST00000481582 HRCP23327 699 aa15.18■□□□□ 0.02
ABCC13-205ENST00000481582 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
ABCC13-205ENST00000481582 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0.01
ABCC13-205ENST00000481582 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
ABCC13-205ENST00000481582 ITGAEP38570 1179 aa15.08■□□□□ 0
ABCC13-205ENST00000481582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
ABCC13-205ENST00000481582 ZEB1P37275 1124 aaPredicted RBP14.92□□□□□ -0.02
ABCC13-205ENST00000481582 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
ABCC13-205ENST00000481582 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
ABCC13-205ENST00000481582 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
ABCC13-205ENST00000481582 NACADO15069 1562 aa14.88□□□□□ -0.03
ABCC13-205ENST00000481582 YTHDC1Q96MU7 727 aaKnown RBP14.88□□□□□ -0.03
ABCC13-205ENST00000481582 P3H3Q8IVL6 736 aa14.84□□□□□ -0.03
ABCC13-205ENST00000481582 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
ABCC13-205ENST00000481582 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
ABCC13-205ENST00000481582 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
ABCC13-205ENST00000481582 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
ABCC13-205ENST00000481582 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
ABCC13-205ENST00000481582 WIZO95785 1651 aa14.64□□□□□ -0.07
ABCC13-205ENST00000481582 FBLN2P98095 1184 aa14.63□□□□□ -0.07
ABCC13-205ENST00000481582 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
ABCC13-205ENST00000481582 ABCC8Q09428 1581 aa14.59□□□□□ -0.07
ABCC13-205ENST00000481582 SOGA1O94964 1423 aa14.59□□□□□ -0.07
ABCC13-205ENST00000481582 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
ABCC13-205ENST00000481582 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
ABCC13-205ENST00000481582 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
ABCC13-205ENST00000481582 CNGB1Q14028 1251 aaPredicted RBP14.54□□□□□ -0.08
ABCC13-205ENST00000481582 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
ABCC13-205ENST00000481582 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
ABCC13-205ENST00000481582 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
ABCC13-205ENST00000481582 POLR3GLQ9BT43 218 aa14.42□□□□□ -0.1
ABCC13-205ENST00000481582 CLIP1P30622 1438 aa14.42□□□□□ -0.1
ABCC13-205ENST00000481582 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
ABCC13-205ENST00000481582 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
ABCC13-205ENST00000481582 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
ABCC13-205ENST00000481582 GOLGA3Q08378 1498 aa14.32□□□□□ -0.12
ABCC13-205ENST00000481582 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
ABCC13-205ENST00000481582 TNIKQ9UKE5 1360 aa14.3□□□□□ -0.12
ABCC13-205ENST00000481582 TOP2AP11388 1531 aaKnown RBP14.3□□□□□ -0.12
ABCC13-205ENST00000481582 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
ABCC13-205ENST00000481582 ZNF777Q9ULD5 760 aaPredicted RBP14.29□□□□□ -0.12
ABCC13-205ENST00000481582 CHIC2Q9UKJ5 165 aa14.29□□□□□ -0.12
ABCC13-205ENST00000481582 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.12
ABCC13-205ENST00000481582 NEFLP07196 543 aa14.27□□□□□ -0.13
ABCC13-205ENST00000481582 ERICH6Q7L0X2 663 aa14.25□□□□□ -0.13
ABCC13-205ENST00000481582 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
ABCC13-205ENST00000481582 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
ABCC13-205ENST00000481582 EEA1Q15075 1411 aa14.23□□□□□ -0.13
ABCC13-205ENST00000481582 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
ABCC13-205ENST00000481582 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
ABCC13-205ENST00000481582 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
ABCC13-205ENST00000481582 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
ABCC13-205ENST00000481582 CUX2O14529 1486 aa14.19□□□□□ -0.14
ABCC13-205ENST00000481582 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
ABCC13-205ENST00000481582 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
ABCC13-205ENST00000481582 RAPGEF2Q9Y4G8 1499 aa14.13□□□□□ -0.15
ABCC13-205ENST00000481582 CHMP7Q8WUX9 453 aaPredicted RBP14.13□□□□□ -0.15
ABCC13-205ENST00000481582 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
ABCC13-205ENST00000481582 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
ABCC13-205ENST00000481582 MTUS2Q5JR59 1369 aa14.1□□□□□ -0.15
ABCC13-205ENST00000481582 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
ABCC13-205ENST00000481582 BCANQ96GW7 911 aa14.08□□□□□ -0.16
ABCC13-205ENST00000481582 MIER1Q8N108 512 aa14.06□□□□□ -0.16
ABCC13-205ENST00000481582 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
ABCC13-205ENST00000481582 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
ABCC13-205ENST00000481582 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
ABCC13-205ENST00000481582 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.17
ABCC13-205ENST00000481582 VPS8Q8N3P4 1428 aa14.01□□□□□ -0.17
ABCC13-205ENST00000481582 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
ABCC13-205ENST00000481582 CDK11AQ9UQ88 783 aaPredicted RBP13.99□□□□□ -0.17
ABCC13-205ENST00000481582 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
ABCC13-205ENST00000481582 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
ABCC13-205ENST00000481582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
ABCC13-205ENST00000481582 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
ABCC13-205ENST00000481582 TONSLQ96HA7 1378 aa13.94□□□□□ -0.18
ABCC13-205ENST00000481582 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms