RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 AEBP2Q6ZN18 517 aaPredicted RBP35.37■■■■□ 3.25
PDCD4-206ENST00000481353 CHIC1Q5VXU3 224 aa33.87■■■■□ 3.01
PDCD4-206ENST00000481353 PHF23Q9BUL5 403 aaPredicted RBP29.94■■■□□ 2.38
PDCD4-206ENST00000481353 SENP3Q9H4L4 574 aaPredicted RBP29.74■■■□□ 2.35
PDCD4-206ENST00000481353 FOXD1Q16676 465 aa27.89■■■□□ 2.06
PDCD4-206ENST00000481353 PLPPR3Q6T4P5 718 aa27.17■■□□□ 1.94
PDCD4-206ENST00000481353 PPP6R1Q9UPN7 881 aa26.61■■□□□ 1.85
PDCD4-206ENST00000481353 ADRA2BP18089 450 aa26.49■■□□□ 1.83
PDCD4-206ENST00000481353 PIAS4Q8N2W9 510 aaPredicted RBP26.08■■□□□ 1.77
PDCD4-206ENST00000481353 MSH5O43196 834 aa25.61■■□□□ 1.69
PDCD4-206ENST00000481353 POTEDQ86YR6 584 aa24.36■■□□□ 1.49
PDCD4-206ENST00000481353 MAPK8IP2Q13387 824 aaPredicted RBP24.24■■□□□ 1.47
PDCD4-206ENST00000481353 PPP4R3CPQ6ZMV5 832 aa24.01■■□□□ 1.43
PDCD4-206ENST00000481353 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
PDCD4-206ENST00000481353 DMRT2Q9Y5R5 561 aa23.76■■□□□ 1.39
PDCD4-206ENST00000481353 CNKSR2Q8WXI2 1034 aa23.32■■□□□ 1.32
PDCD4-206ENST00000481353 HOXD11P31277 338 aaPredicted RBP23.08■■□□□ 1.29
PDCD4-206ENST00000481353 KCNA4P22459 653 aa23.07■■□□□ 1.28
PDCD4-206ENST00000481353 NCBP3Q53F19 620 aaKnown RBP23■■□□□ 1.27
PDCD4-206ENST00000481353 RNF216Q9NWF9 866 aaPredicted RBP22.99■■□□□ 1.27
PDCD4-206ENST00000481353 NPM3O75607 178 aaKnown RBP22.97■■□□□ 1.27
PDCD4-206ENST00000481353 DCAF8L1A6NGE4 600 aa22.74■■□□□ 1.23
PDCD4-206ENST00000481353 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
PDCD4-206ENST00000481353 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
PDCD4-206ENST00000481353 RNF39Q9H2S5 420 aa22.07■■□□□ 1.12
PDCD4-206ENST00000481353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDCD4-206ENST00000481353 SLC4A2P04920 1241 aa21.88■■□□□ 1.09
PDCD4-206ENST00000481353 CACNB1Q02641 598 aaPredicted RBP21.75■■□□□ 1.07
PDCD4-206ENST00000481353 SLC4A1APQ9BWU0 796 aaKnown RBP21.73■■□□□ 1.07
PDCD4-206ENST00000481353 U3KPZ7 1027 aaPredicted RBP21.69■■□□□ 1.06
PDCD4-206ENST00000481353 C1QBPQ07021 282 aaKnown RBP21.62■■□□□ 1.05
PDCD4-206ENST00000481353 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
PDCD4-206ENST00000481353 ZBTB22O15209 634 aa21.35■■□□□ 1.01
PDCD4-206ENST00000481353 SPINK5Q9NQ38 1064 aaPredicted RBP21.29■■□□□ 1
PDCD4-206ENST00000481353 FOXD4L1Q9NU39 408 aa21.17■□□□□ 0.98
PDCD4-206ENST00000481353 MYCNP04198 464 aaPredicted RBP21.07■□□□□ 0.96
PDCD4-206ENST00000481353 CAPN15O75808 1086 aa21.04■□□□□ 0.96
PDCD4-206ENST00000481353 SAMD1Q6SPF0 538 aaPredicted RBP20.89■□□□□ 0.93
PDCD4-206ENST00000481353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
PDCD4-206ENST00000481353 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
PDCD4-206ENST00000481353 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
PDCD4-206ENST00000481353 DSG3P32926 999 aa20.87■□□□□ 0.93
PDCD4-206ENST00000481353 ATF5Q9Y2D1 282 aaPredicted RBP20.87■□□□□ 0.93
PDCD4-206ENST00000481353 ABCB7O75027 752 aa20.75■□□□□ 0.91
PDCD4-206ENST00000481353 APLP2Q06481 763 aa20.68■□□□□ 0.9
PDCD4-206ENST00000481353 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
PDCD4-206ENST00000481353 POLA2Q14181 598 aa20.44■□□□□ 0.86
PDCD4-206ENST00000481353 ATXN8OSP0DMR3 200 aa20.34■□□□□ 0.85
PDCD4-206ENST00000481353 MKRN4PQ13434 485 aaPredicted RBP19.89■□□□□ 0.77
PDCD4-206ENST00000481353 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
PDCD4-206ENST00000481353 ZBTB12Q9Y330 459 aaPredicted RBP19.79■□□□□ 0.76
PDCD4-206ENST00000481353 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
PDCD4-206ENST00000481353 FBLN2P98095 1184 aa19.61■□□□□ 0.73
PDCD4-206ENST00000481353 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
PDCD4-206ENST00000481353 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
PDCD4-206ENST00000481353 SPDYE2BA6NHP3 402 aa19.35■□□□□ 0.69
PDCD4-206ENST00000481353 SPDYE6P0CI01 402 aa19.35■□□□□ 0.69
PDCD4-206ENST00000481353 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
PDCD4-206ENST00000481353 REM2Q8IYK8 340 aaPredicted RBP19.34■□□□□ 0.69
PDCD4-206ENST00000481353 RTN4Q9NQC3 1192 aaKnown RBP19.31■□□□□ 0.68
PDCD4-206ENST00000481353 FKBP8Q14318 412 aa19.3■□□□□ 0.68
PDCD4-206ENST00000481353 SSUH2Q9Y2M2 353 aa19.28■□□□□ 0.68
PDCD4-206ENST00000481353 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
PDCD4-206ENST00000481353 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
PDCD4-206ENST00000481353 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
PDCD4-206ENST00000481353 POTEHQ6S545 545 aa19.12■□□□□ 0.65
PDCD4-206ENST00000481353 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
PDCD4-206ENST00000481353 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
PDCD4-206ENST00000481353 SPDYE4A6NLX3 237 aa19.02■□□□□ 0.64
PDCD4-206ENST00000481353 PIP4P2Q8N4L2 257 aa18.93■□□□□ 0.62
PDCD4-206ENST00000481353 CLEC11AQ9Y240 323 aa18.92■□□□□ 0.62
PDCD4-206ENST00000481353 SPDYE1Q8NFV5 336 aaPredicted RBP18.86■□□□□ 0.61
PDCD4-206ENST00000481353 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDCD4-206ENST00000481353 PROM2Q8N271 834 aa18.71■□□□□ 0.59
PDCD4-206ENST00000481353 CHADLQ6NUI6 762 aa18.66■□□□□ 0.58
PDCD4-206ENST00000481353 PRKAR2AP13861 404 aaKnown RBP18.63■□□□□ 0.57
PDCD4-206ENST00000481353 PRR29P0C7W0 189 aa18.61■□□□□ 0.57
PDCD4-206ENST00000481353 EVX2Q03828 476 aa18.44■□□□□ 0.54
PDCD4-206ENST00000481353 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
PDCD4-206ENST00000481353 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
PDCD4-206ENST00000481353 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
PDCD4-206ENST00000481353 HAX1O00165 279 aa18.34■□□□□ 0.53
PDCD4-206ENST00000481353 FARP1Q9Y4F1 1045 aaPredicted RBP18.29■□□□□ 0.52
PDCD4-206ENST00000481353 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
PDCD4-206ENST00000481353 C19orf67A6NJJ6 358 aa18.23■□□□□ 0.51
PDCD4-206ENST00000481353 SP7Q8TDD2 431 aaPredicted RBP18.15■□□□□ 0.5
PDCD4-206ENST00000481353 VASPP50552 380 aaPredicted RBP18.11■□□□□ 0.49
PDCD4-206ENST00000481353 CD44P16070 742 aaKnown RBP18.04■□□□□ 0.48
PDCD4-206ENST00000481353 MIER1Q8N108 512 aa18.03■□□□□ 0.48
PDCD4-206ENST00000481353 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
PDCD4-206ENST00000481353 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
PDCD4-206ENST00000481353 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
PDCD4-206ENST00000481353 GABBR2O75899 941 aa17.85■□□□□ 0.45
PDCD4-206ENST00000481353 NPM1P06748 294 aaKnown RBP eCLIP17.84■□□□□ 0.45
PDCD4-206ENST00000481353 PLCB2Q00722 1185 aa17.84■□□□□ 0.45
PDCD4-206ENST00000481353 RASEFQ8IZ41 740 aa17.82■□□□□ 0.44
PDCD4-206ENST00000481353 PHF12Q96QT6 1004 aa17.8■□□□□ 0.44
PDCD4-206ENST00000481353 ZNF579Q8NAF0 562 aaKnown RBP17.77■□□□□ 0.44
PDCD4-206ENST00000481353 TSPYL2Q9H2G4 693 aaPredicted RBP17.77■□□□□ 0.44
PDCD4-206ENST00000481353 NUBP1P53384 320 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms