RNA–Protein interactions for RNA: ENST00000481273.5

PTK7-213, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTK7, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-213ENST00000481273 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.88
PTK7-213ENST00000481273 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
PTK7-213ENST00000481273 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
PTK7-213ENST00000481273 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
PTK7-213ENST00000481273 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
PTK7-213ENST00000481273 PPARGC1BQ86YN6 1023 aaKnown RBP18.19■□□□□ 0.5
PTK7-213ENST00000481273 HRCP23327 699 aa18.11■□□□□ 0.49
PTK7-213ENST00000481273 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
PTK7-213ENST00000481273 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
PTK7-213ENST00000481273 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
PTK7-213ENST00000481273 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
PTK7-213ENST00000481273 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
PTK7-213ENST00000481273 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
PTK7-213ENST00000481273 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
PTK7-213ENST00000481273 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
PTK7-213ENST00000481273 TRIM41Q8WV44 630 aa17.21■□□□□ 0.34
PTK7-213ENST00000481273 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
PTK7-213ENST00000481273 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
PTK7-213ENST00000481273 ZEB1P37275 1124 aaPredicted RBP17.07■□□□□ 0.32
PTK7-213ENST00000481273 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
PTK7-213ENST00000481273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
PTK7-213ENST00000481273 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
PTK7-213ENST00000481273 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
PTK7-213ENST00000481273 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
PTK7-213ENST00000481273 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
PTK7-213ENST00000481273 GTF3C3Q9Y5Q9 886 aa16.83■□□□□ 0.28
PTK7-213ENST00000481273 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
PTK7-213ENST00000481273 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
PTK7-213ENST00000481273 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
PTK7-213ENST00000481273 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
PTK7-213ENST00000481273 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
PTK7-213ENST00000481273 UBTFP17480 764 aaKnown RBP16.54■□□□□ 0.24
PTK7-213ENST00000481273 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
PTK7-213ENST00000481273 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
PTK7-213ENST00000481273 ABCC9O60706 1549 aa16.42■□□□□ 0.22
PTK7-213ENST00000481273 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
PTK7-213ENST00000481273 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
PTK7-213ENST00000481273 MIER1Q8N108 512 aa16.33■□□□□ 0.21
PTK7-213ENST00000481273 MYT1Q01538 1121 aa16.27■□□□□ 0.2
PTK7-213ENST00000481273 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
PTK7-213ENST00000481273 APLP2Q06481 763 aa16.25■□□□□ 0.19
PTK7-213ENST00000481273 ITGAEP38570 1179 aa16.14■□□□□ 0.17
PTK7-213ENST00000481273 BCANQ96GW7 911 aa16.12■□□□□ 0.17
PTK7-213ENST00000481273 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
PTK7-213ENST00000481273 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
PTK7-213ENST00000481273 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.17
PTK7-213ENST00000481273 SOGA1O94964 1423 aa16.05■□□□□ 0.16
PTK7-213ENST00000481273 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
PTK7-213ENST00000481273 NACADO15069 1562 aa16.04■□□□□ 0.16
PTK7-213ENST00000481273 CCDC88BA6NC98 1476 aa16.01■□□□□ 0.15
PTK7-213ENST00000481273 WIZO95785 1651 aa16■□□□□ 0.15
PTK7-213ENST00000481273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.152e-7■□□□□ 8.5
PTK7-213ENST00000481273 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
PTK7-213ENST00000481273 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
PTK7-213ENST00000481273 ATP1B4Q9UN42 357 aaPredicted RBP15.85■□□□□ 0.13
PTK7-213ENST00000481273 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
PTK7-213ENST00000481273 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
PTK7-213ENST00000481273 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
PTK7-213ENST00000481273 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
PTK7-213ENST00000481273 FKBP8Q14318 412 aa15.77■□□□□ 0.12
PTK7-213ENST00000481273 CLIP1P30622 1438 aa15.76■□□□□ 0.11
PTK7-213ENST00000481273 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
PTK7-213ENST00000481273 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.11
PTK7-213ENST00000481273 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
PTK7-213ENST00000481273 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
PTK7-213ENST00000481273 NEFLP07196 543 aa15.7■□□□□ 0.1
PTK7-213ENST00000481273 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
PTK7-213ENST00000481273 KANK4Q5T7N3 995 aaPredicted RBP15.67■□□□□ 0.1
PTK7-213ENST00000481273 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
PTK7-213ENST00000481273 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
PTK7-213ENST00000481273 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
PTK7-213ENST00000481273 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
PTK7-213ENST00000481273 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
PTK7-213ENST00000481273 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
PTK7-213ENST00000481273 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
PTK7-213ENST00000481273 SIN3AQ96ST3 1273 aa15.59■□□□□ 0.09
PTK7-213ENST00000481273 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
PTK7-213ENST00000481273 ERICH6Q7L0X2 663 aa15.56■□□□□ 0.08
PTK7-213ENST00000481273 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
PTK7-213ENST00000481273 VPS8Q8N3P4 1428 aa15.54■□□□□ 0.08
PTK7-213ENST00000481273 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
PTK7-213ENST00000481273 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
PTK7-213ENST00000481273 EEA1Q15075 1411 aa15.53■□□□□ 0.08
PTK7-213ENST00000481273 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
PTK7-213ENST00000481273 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
PTK7-213ENST00000481273 ANP32CO43423 234 aa15.46■□□□□ 0.06
PTK7-213ENST00000481273 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.06
PTK7-213ENST00000481273 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
PTK7-213ENST00000481273 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
PTK7-213ENST00000481273 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
PTK7-213ENST00000481273 HNRNPUQ00839 825 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTK7-213ENST00000481273 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
PTK7-213ENST00000481273 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
PTK7-213ENST00000481273 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
PTK7-213ENST00000481273 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
PTK7-213ENST00000481273 SYNJ1O43426 1573 aa15.33■□□□□ 0.04
PTK7-213ENST00000481273 KIF21BO75037 1637 aa15.32■□□□□ 0.04
PTK7-213ENST00000481273 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
PTK7-213ENST00000481273 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
PTK7-213ENST00000481273 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms