RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
R3HDM1-214ENST00000480793 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
R3HDM1-214ENST00000480793 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
R3HDM1-214ENST00000480793 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
R3HDM1-214ENST00000480793 FOXD1Q16676 465 aa15.25■□□□□ 0.03
R3HDM1-214ENST00000480793 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
R3HDM1-214ENST00000480793 MSH5O43196 834 aa14.5□□□□□ -0.09
R3HDM1-214ENST00000480793 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
R3HDM1-214ENST00000480793 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
R3HDM1-214ENST00000480793 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
R3HDM1-214ENST00000480793 ADRA2BP18089 450 aa13.87□□□□□ -0.19
R3HDM1-214ENST00000480793 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
R3HDM1-214ENST00000480793 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
R3HDM1-214ENST00000480793 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
R3HDM1-214ENST00000480793 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
R3HDM1-214ENST00000480793 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
R3HDM1-214ENST00000480793 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
R3HDM1-214ENST00000480793 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
R3HDM1-214ENST00000480793 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
R3HDM1-214ENST00000480793 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
R3HDM1-214ENST00000480793 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
R3HDM1-214ENST00000480793 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
R3HDM1-214ENST00000480793 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
R3HDM1-214ENST00000480793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.536e-8■□□□□ 10.4
R3HDM1-214ENST00000480793 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
R3HDM1-214ENST00000480793 POTEHQ6S545 545 aa11.54□□□□□ -0.56
R3HDM1-214ENST00000480793 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
R3HDM1-214ENST00000480793 CAPN15O75808 1086 aa11.39□□□□□ -0.59
R3HDM1-214ENST00000480793 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
R3HDM1-214ENST00000480793 DSG3P32926 999 aa11.37□□□□□ -0.59
R3HDM1-214ENST00000480793 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
R3HDM1-214ENST00000480793 APLP2Q06481 763 aa11.13□□□□□ -0.63
R3HDM1-214ENST00000480793 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
R3HDM1-214ENST00000480793 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-214ENST00000480793 ABCB7O75027 752 aa11.06□□□□□ -0.64
R3HDM1-214ENST00000480793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
R3HDM1-214ENST00000480793 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
R3HDM1-214ENST00000480793 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
R3HDM1-214ENST00000480793 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
R3HDM1-214ENST00000480793 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-214ENST00000480793 KCNA4P22459 653 aa10.82□□□□□ -0.68
R3HDM1-214ENST00000480793 CHRDL2Q6WN34 429 aa10.81□□□□□ -0.68
R3HDM1-214ENST00000480793 POLA2Q14181 598 aa10.68□□□□□ -0.7
R3HDM1-214ENST00000480793 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
R3HDM1-214ENST00000480793 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
R3HDM1-214ENST00000480793 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
R3HDM1-214ENST00000480793 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
R3HDM1-214ENST00000480793 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
R3HDM1-214ENST00000480793 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
R3HDM1-214ENST00000480793 HAX1O00165 279 aa10.41□□□□□ -0.74
R3HDM1-214ENST00000480793 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
R3HDM1-214ENST00000480793 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
R3HDM1-214ENST00000480793 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
R3HDM1-214ENST00000480793 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
R3HDM1-214ENST00000480793 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
R3HDM1-214ENST00000480793 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
R3HDM1-214ENST00000480793 EVX2Q03828 476 aa10.15□□□□□ -0.78
R3HDM1-214ENST00000480793 SPDYE2BA6NHP3 402 aa10.1□□□□□ -0.79
R3HDM1-214ENST00000480793 SPDYE6P0CI01 402 aa10.1□□□□□ -0.79
R3HDM1-214ENST00000480793 SPDYE2Q495Y8 402 aa10.1□□□□□ -0.79
R3HDM1-214ENST00000480793 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
R3HDM1-214ENST00000480793 FBLN2P98095 1184 aa10.06□□□□□ -0.8
R3HDM1-214ENST00000480793 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
R3HDM1-214ENST00000480793 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
R3HDM1-214ENST00000480793 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
R3HDM1-214ENST00000480793 ATXN8OSP0DMR3 200 aa9.99□□□□□ -0.81
R3HDM1-214ENST00000480793 GABBR2O75899 941 aa9.96□□□□□ -0.82
R3HDM1-214ENST00000480793 LHX8Q68G74 356 aa9.96□□□□□ -0.82
R3HDM1-214ENST00000480793 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
R3HDM1-214ENST00000480793 ZBTB22O15209 634 aa9.9□□□□□ -0.82
R3HDM1-214ENST00000480793 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
R3HDM1-214ENST00000480793 CHADLQ6NUI6 762 aa9.86□□□□□ -0.83
R3HDM1-214ENST00000480793 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
R3HDM1-214ENST00000480793 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
R3HDM1-214ENST00000480793 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
R3HDM1-214ENST00000480793 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
R3HDM1-214ENST00000480793 CLCN6P51797 869 aa9.72□□□□□ -0.85
R3HDM1-214ENST00000480793 PLSCR2Q9NRY7 297 aa9.71□□□□□ -0.86
R3HDM1-214ENST00000480793 POTEIP0CG38 1075 aa9.7□□□□□ -0.86
R3HDM1-214ENST00000480793 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
R3HDM1-214ENST00000480793 DCBLD2Q96PD2 775 aa9.66□□□□□ -0.86
R3HDM1-214ENST00000480793 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
R3HDM1-214ENST00000480793 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
R3HDM1-214ENST00000480793 GALR2O43603 387 aaPredicted RBP9.46□□□□□ -0.9
R3HDM1-214ENST00000480793 PAK3O75914 559 aaPredicted RBP9.44□□□□□ -0.9
R3HDM1-214ENST00000480793 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
R3HDM1-214ENST00000480793 CREBZFQ9NS37 354 aa9.43□□□□□ -0.9
R3HDM1-214ENST00000480793 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
R3HDM1-214ENST00000480793 POTEMA6NI47 508 aa9.41□□□□□ -0.9
R3HDM1-214ENST00000480793 POTEB2H3BUK9 544 aa9.37□□□□□ -0.91
R3HDM1-214ENST00000480793 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
R3HDM1-214ENST00000480793 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
R3HDM1-214ENST00000480793 NPM1P06748 294 aaKnown RBP eCLIP9.31□□□□□ -0.92
R3HDM1-214ENST00000480793 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
R3HDM1-214ENST00000480793 PELP1Q8IZL8 1130 aaKnown RBP9.27□□□□□ -0.93
R3HDM1-214ENST00000480793 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
R3HDM1-214ENST00000480793 SLC39A7Q92504 469 aa9.26□□□□□ -0.93
R3HDM1-214ENST00000480793 MAMSTRQ6ZN01 415 aa9.25□□□□□ -0.93
R3HDM1-214ENST00000480793 C7P10643 843 aa9.23□□□□□ -0.93
R3HDM1-214ENST00000480793 ASTLQ6HA08 431 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms