RNA–Protein interactions for RNA: ENST00000480292.5

MFSD1-213, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 1 (best)

Gene MFSD1, Length 2,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-213ENST00000480292 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
MFSD1-213ENST00000480292 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
MFSD1-213ENST00000480292 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
MFSD1-213ENST00000480292 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
MFSD1-213ENST00000480292 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
MFSD1-213ENST00000480292 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
MFSD1-213ENST00000480292 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
MFSD1-213ENST00000480292 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
MFSD1-213ENST00000480292 ABCC9O60706 1549 aa29.07■■■□□ 2.24
MFSD1-213ENST00000480292 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
MFSD1-213ENST00000480292 NACADO15069 1562 aa28.69■■■□□ 2.18
MFSD1-213ENST00000480292 SCRIBQ14160 1630 aa28.59■■■□□ 2.17
MFSD1-213ENST00000480292 RB1CC1Q8TDY2 1594 aa28.41■■■□□ 2.14
MFSD1-213ENST00000480292 RSF1Q96T23 1441 aaPredicted RBP28.38■■■□□ 2.13
MFSD1-213ENST00000480292 LOC105371045A0A1W2PR82 267 aa28.16■■■□□ 2.1
MFSD1-213ENST00000480292 HRCP23327 699 aa28.12■■■□□ 2.09
MFSD1-213ENST00000480292 PCGF6Q9BYE7 350 aa28.08■■■□□ 2.09
MFSD1-213ENST00000480292 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
MFSD1-213ENST00000480292 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
MFSD1-213ENST00000480292 MROH2BQ7Z745 1585 aa27.88■■■□□ 2.05
MFSD1-213ENST00000480292 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
MFSD1-213ENST00000480292 WIZO95785 1651 aa27.75■■■□□ 2.03
MFSD1-213ENST00000480292 TRIM26Q12899 539 aaPredicted RBP27.64■■■□□ 2.01
MFSD1-213ENST00000480292 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
MFSD1-213ENST00000480292 FAM9AQ8IZU1 332 aaPredicted RBP27.55■■■□□ 2
MFSD1-213ENST00000480292 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
MFSD1-213ENST00000480292 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
MFSD1-213ENST00000480292 PPARGC1BQ86YN6 1023 aaKnown RBP27.45■■□□□ 1.99
MFSD1-213ENST00000480292 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
MFSD1-213ENST00000480292 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
MFSD1-213ENST00000480292 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
MFSD1-213ENST00000480292 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
MFSD1-213ENST00000480292 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.94
MFSD1-213ENST00000480292 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
MFSD1-213ENST00000480292 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
MFSD1-213ENST00000480292 ZEB1P37275 1124 aaPredicted RBP27.05■■□□□ 1.92
MFSD1-213ENST00000480292 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.89
MFSD1-213ENST00000480292 SOGA1O94964 1423 aa26.81■■□□□ 1.88
MFSD1-213ENST00000480292 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
MFSD1-213ENST00000480292 EEA1Q15075 1411 aa26.76■■□□□ 1.87
MFSD1-213ENST00000480292 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
MFSD1-213ENST00000480292 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
MFSD1-213ENST00000480292 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
MFSD1-213ENST00000480292 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
MFSD1-213ENST00000480292 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
MFSD1-213ENST00000480292 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
MFSD1-213ENST00000480292 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
MFSD1-213ENST00000480292 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
MFSD1-213ENST00000480292 UBTFP17480 764 aaKnown RBP26.53■■□□□ 1.84
MFSD1-213ENST00000480292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.46■■□□□ 1.83
MFSD1-213ENST00000480292 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
MFSD1-213ENST00000480292 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
MFSD1-213ENST00000480292 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
MFSD1-213ENST00000480292 KIF21BO75037 1637 aa26.41■■□□□ 1.82
MFSD1-213ENST00000480292 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
MFSD1-213ENST00000480292 TTBK1Q5TCY1 1321 aaPredicted RBP26.38■■□□□ 1.81
MFSD1-213ENST00000480292 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
MFSD1-213ENST00000480292 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
MFSD1-213ENST00000480292 CLIP1P30622 1438 aa26.21■■□□□ 1.79
MFSD1-213ENST00000480292 BIVM-ERCC5R4GMW8 1640 aa26.19■■□□□ 1.78
MFSD1-213ENST00000480292 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
MFSD1-213ENST00000480292 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
MFSD1-213ENST00000480292 ERICH3Q5RHP9 1530 aa25.99■■□□□ 1.75
MFSD1-213ENST00000480292 CUX1P39880 1505 aa25.98■■□□□ 1.75
MFSD1-213ENST00000480292 CFTRP13569 1480 aa25.97■■□□□ 1.75
MFSD1-213ENST00000480292 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
MFSD1-213ENST00000480292 APLP2Q06481 763 aa25.95■■□□□ 1.75
MFSD1-213ENST00000480292 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
MFSD1-213ENST00000480292 HNRNPUL2Q1KMD3 747 aaKnown RBP25.9■■□□□ 1.74
MFSD1-213ENST00000480292 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.74
MFSD1-213ENST00000480292 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
MFSD1-213ENST00000480292 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
MFSD1-213ENST00000480292 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
MFSD1-213ENST00000480292 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
MFSD1-213ENST00000480292 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
MFSD1-213ENST00000480292 ZNF316A6NFI3 1004 aaPredicted RBP25.75■■□□□ 1.71
MFSD1-213ENST00000480292 ACIN1Q9UKV3 1341 aaKnown RBP25.66■■□□□ 1.7
MFSD1-213ENST00000480292 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
MFSD1-213ENST00000480292 NEUROD1Q13562 356 aa25.6■■□□□ 1.69
MFSD1-213ENST00000480292 NESP48681 1621 aa25.59■■□□□ 1.69
MFSD1-213ENST00000480292 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
MFSD1-213ENST00000480292 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
MFSD1-213ENST00000480292 CUX2O14529 1486 aa25.58■■□□□ 1.69
MFSD1-213ENST00000480292 IGF1RP08069 1367 aa25.56■■□□□ 1.68
MFSD1-213ENST00000480292 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
MFSD1-213ENST00000480292 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
MFSD1-213ENST00000480292 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
MFSD1-213ENST00000480292 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
MFSD1-213ENST00000480292 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
MFSD1-213ENST00000480292 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
MFSD1-213ENST00000480292 DHX57Q6P158 1386 aaKnown RBP25.46■■□□□ 1.67
MFSD1-213ENST00000480292 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.66
MFSD1-213ENST00000480292 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
MFSD1-213ENST00000480292 CCNB3Q8WWL7 1395 aa25.38■■□□□ 1.65
MFSD1-213ENST00000480292 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
MFSD1-213ENST00000480292 MAP3K1Q13233 1512 aa25.35■■□□□ 1.65
MFSD1-213ENST00000480292 MIER1Q8N108 512 aa25.33■■□□□ 1.65
MFSD1-213ENST00000480292 TIAM1Q13009 1591 aa25.33■■□□□ 1.65
MFSD1-213ENST00000480292 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
MFSD1-213ENST00000480292 GTF3C3Q9Y5Q9 886 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms