RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
ACTR3B-204ENST00000479402 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.78
ACTR3B-204ENST00000479402 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
ACTR3B-204ENST00000479402 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
ACTR3B-204ENST00000479402 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
ACTR3B-204ENST00000479402 APLP2Q06481 763 aa19.11■□□□□ 0.65
ACTR3B-204ENST00000479402 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
ACTR3B-204ENST00000479402 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
ACTR3B-204ENST00000479402 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
ACTR3B-204ENST00000479402 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
ACTR3B-204ENST00000479402 CCER1Q8TC90 406 aaPredicted RBP18.73■□□□□ 0.59
ACTR3B-204ENST00000479402 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
ACTR3B-204ENST00000479402 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
ACTR3B-204ENST00000479402 MYT1Q01538 1121 aa18.64■□□□□ 0.57
ACTR3B-204ENST00000479402 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
ACTR3B-204ENST00000479402 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
ACTR3B-204ENST00000479402 NEFLP07196 543 aa18.35■□□□□ 0.53
ACTR3B-204ENST00000479402 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
ACTR3B-204ENST00000479402 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
ACTR3B-204ENST00000479402 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
ACTR3B-204ENST00000479402 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
ACTR3B-204ENST00000479402 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
ACTR3B-204ENST00000479402 HRCP23327 699 aa17.96■□□□□ 0.47
ACTR3B-204ENST00000479402 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
ACTR3B-204ENST00000479402 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
ACTR3B-204ENST00000479402 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
ACTR3B-204ENST00000479402 ITGAEP38570 1179 aa17.52■□□□□ 0.4
ACTR3B-204ENST00000479402 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
ACTR3B-204ENST00000479402 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
ACTR3B-204ENST00000479402 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
ACTR3B-204ENST00000479402 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
ACTR3B-204ENST00000479402 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
ACTR3B-204ENST00000479402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.38
ACTR3B-204ENST00000479402 ZNF316A6NFI3 1004 aaPredicted RBP17.41■□□□□ 0.38
ACTR3B-204ENST00000479402 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
ACTR3B-204ENST00000479402 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
ACTR3B-204ENST00000479402 ABCC9O60706 1549 aa17.22■□□□□ 0.35
ACTR3B-204ENST00000479402 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
ACTR3B-204ENST00000479402 ANP32CO43423 234 aa17.18■□□□□ 0.34
ACTR3B-204ENST00000479402 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
ACTR3B-204ENST00000479402 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
ACTR3B-204ENST00000479402 CNGB1Q14028 1251 aaPredicted RBP17.14■□□□□ 0.33
ACTR3B-204ENST00000479402 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
ACTR3B-204ENST00000479402 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
ACTR3B-204ENST00000479402 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
ACTR3B-204ENST00000479402 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
ACTR3B-204ENST00000479402 BCANQ96GW7 911 aa16.98■□□□□ 0.31
ACTR3B-204ENST00000479402 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
ACTR3B-204ENST00000479402 ANP32AP39687 249 aaKnown RBP16.91■□□□□ 0.3
ACTR3B-204ENST00000479402 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
ACTR3B-204ENST00000479402 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
ACTR3B-204ENST00000479402 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.29
ACTR3B-204ENST00000479402 NEFMP07197 916 aa16.83■□□□□ 0.28
ACTR3B-204ENST00000479402 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTR3B-204ENST00000479402 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
ACTR3B-204ENST00000479402 ANP32BQ92688 251 aaKnown RBP16.68■□□□□ 0.26
ACTR3B-204ENST00000479402 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
ACTR3B-204ENST00000479402 UPF2Q9HAU5 1272 aaKnown RBP16.62■□□□□ 0.25
ACTR3B-204ENST00000479402 FKBP8Q14318 412 aa16.62■□□□□ 0.25
ACTR3B-204ENST00000479402 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
ACTR3B-204ENST00000479402 FBLN2P98095 1184 aa16.55■□□□□ 0.24
ACTR3B-204ENST00000479402 GLIPR1L2Q4G1C9 344 aa16.54■□□□□ 0.24
ACTR3B-204ENST00000479402 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
ACTR3B-204ENST00000479402 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
ACTR3B-204ENST00000479402 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
ACTR3B-204ENST00000479402 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
ACTR3B-204ENST00000479402 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
ACTR3B-204ENST00000479402 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
ACTR3B-204ENST00000479402 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
ACTR3B-204ENST00000479402 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
ACTR3B-204ENST00000479402 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
ACTR3B-204ENST00000479402 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
ACTR3B-204ENST00000479402 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
ACTR3B-204ENST00000479402 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
ACTR3B-204ENST00000479402 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
ACTR3B-204ENST00000479402 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
ACTR3B-204ENST00000479402 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
ACTR3B-204ENST00000479402 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
ACTR3B-204ENST00000479402 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTR3B-204ENST00000479402 EEA1Q15075 1411 aa16.35■□□□□ 0.21
ACTR3B-204ENST00000479402 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
ACTR3B-204ENST00000479402 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
ACTR3B-204ENST00000479402 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
ACTR3B-204ENST00000479402 ANP32EQ9BTT0 268 aa16.31■□□□□ 0.2
ACTR3B-204ENST00000479402 CLIP1P30622 1438 aa16.29■□□□□ 0.2
ACTR3B-204ENST00000479402 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
ACTR3B-204ENST00000479402 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.2
ACTR3B-204ENST00000479402 BECN1Q14457 450 aa16.26■□□□□ 0.19
ACTR3B-204ENST00000479402 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
ACTR3B-204ENST00000479402 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
ACTR3B-204ENST00000479402 NBR1Q14596 966 aa16.26■□□□□ 0.19
ACTR3B-204ENST00000479402 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
ACTR3B-204ENST00000479402 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
ACTR3B-204ENST00000479402 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
ACTR3B-204ENST00000479402 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
ACTR3B-204ENST00000479402 MIER1Q8N108 512 aa16.23■□□□□ 0.19
ACTR3B-204ENST00000479402 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
ACTR3B-204ENST00000479402 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
ACTR3B-204ENST00000479402 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
ACTR3B-204ENST00000479402 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms