RNA–Protein interactions for RNA: ENST00000479252.1

LRRC8C-203, Transcript of leucine rich repeat containing 8 VRAC subunit C, humanhuman

TSL 1 (best)

Gene LRRC8C, Length 2,993 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8C-203ENST00000479252 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
LRRC8C-203ENST00000479252 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
LRRC8C-203ENST00000479252 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
LRRC8C-203ENST00000479252 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
LRRC8C-203ENST00000479252 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
LRRC8C-203ENST00000479252 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
LRRC8C-203ENST00000479252 ABCC9O60706 1549 aa28.79■■■□□ 2.2
LRRC8C-203ENST00000479252 SCRIBQ14160 1630 aa28.16■■■□□ 2.1
LRRC8C-203ENST00000479252 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
LRRC8C-203ENST00000479252 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
LRRC8C-203ENST00000479252 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
LRRC8C-203ENST00000479252 NACADO15069 1562 aa27.53■■■□□ 2
LRRC8C-203ENST00000479252 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
LRRC8C-203ENST00000479252 EHMT2Q96KQ7 1210 aa27.39■■□□□ 1.97
LRRC8C-203ENST00000479252 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
LRRC8C-203ENST00000479252 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
LRRC8C-203ENST00000479252 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
LRRC8C-203ENST00000479252 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
LRRC8C-203ENST00000479252 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
LRRC8C-203ENST00000479252 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
LRRC8C-203ENST00000479252 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
LRRC8C-203ENST00000479252 WIZO95785 1651 aa26.98■■□□□ 1.91
LRRC8C-203ENST00000479252 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
LRRC8C-203ENST00000479252 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
LRRC8C-203ENST00000479252 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
LRRC8C-203ENST00000479252 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
LRRC8C-203ENST00000479252 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
LRRC8C-203ENST00000479252 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
LRRC8C-203ENST00000479252 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
LRRC8C-203ENST00000479252 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
LRRC8C-203ENST00000479252 TOP2AP11388 1531 aaKnown RBP26.25■■□□□ 1.79
LRRC8C-203ENST00000479252 TTBK1Q5TCY1 1321 aaPredicted RBP26.21■■□□□ 1.79
LRRC8C-203ENST00000479252 SMARCA2P51531 1590 aa26.18■■□□□ 1.78
LRRC8C-203ENST00000479252 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
LRRC8C-203ENST00000479252 RANGAP1P46060 587 aaPredicted RBP26.15■■□□□ 1.78
LRRC8C-203ENST00000479252 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.77
LRRC8C-203ENST00000479252 SOGA1O94964 1423 aa25.98■■□□□ 1.75
LRRC8C-203ENST00000479252 UBTFP17480 764 aaKnown RBP25.96■■□□□ 1.75
LRRC8C-203ENST00000479252 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
LRRC8C-203ENST00000479252 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
LRRC8C-203ENST00000479252 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
LRRC8C-203ENST00000479252 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
LRRC8C-203ENST00000479252 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
LRRC8C-203ENST00000479252 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
LRRC8C-203ENST00000479252 TRIM26Q12899 539 aaPredicted RBP25.65■■□□□ 1.7
LRRC8C-203ENST00000479252 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
LRRC8C-203ENST00000479252 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
LRRC8C-203ENST00000479252 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
LRRC8C-203ENST00000479252 HRCP23327 699 aa25.5■■□□□ 1.67
LRRC8C-203ENST00000479252 CEP162Q5TB80 1403 aa25.39■■□□□ 1.65
LRRC8C-203ENST00000479252 NESP48681 1621 aa25.38■■□□□ 1.65
LRRC8C-203ENST00000479252 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
LRRC8C-203ENST00000479252 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
LRRC8C-203ENST00000479252 CFTRP13569 1480 aa25.27■■□□□ 1.64
LRRC8C-203ENST00000479252 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
LRRC8C-203ENST00000479252 CUX1P39880 1505 aa25.25■■□□□ 1.63
LRRC8C-203ENST00000479252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
LRRC8C-203ENST00000479252 TNIKQ9UKE5 1360 aa25.22■■□□□ 1.63
LRRC8C-203ENST00000479252 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
LRRC8C-203ENST00000479252 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
LRRC8C-203ENST00000479252 EEA1Q15075 1411 aa25.15■■□□□ 1.62
LRRC8C-203ENST00000479252 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
LRRC8C-203ENST00000479252 ATP1B4Q9UN42 357 aaPredicted RBP25.13■■□□□ 1.61
LRRC8C-203ENST00000479252 APLP2Q06481 763 aa25.11■■□□□ 1.61
LRRC8C-203ENST00000479252 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
LRRC8C-203ENST00000479252 CLIP1P30622 1438 aa25.09■■□□□ 1.61
LRRC8C-203ENST00000479252 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
LRRC8C-203ENST00000479252 CUX2O14529 1486 aa25.09■■□□□ 1.61
LRRC8C-203ENST00000479252 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
LRRC8C-203ENST00000479252 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
LRRC8C-203ENST00000479252 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
LRRC8C-203ENST00000479252 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
LRRC8C-203ENST00000479252 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
LRRC8C-203ENST00000479252 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
LRRC8C-203ENST00000479252 BIVM-ERCC5R4GMW8 1640 aa24.92■■□□□ 1.58
LRRC8C-203ENST00000479252 IGF1RP08069 1367 aa24.89■■□□□ 1.58
LRRC8C-203ENST00000479252 ITGAEP38570 1179 aa24.89■■□□□ 1.57
LRRC8C-203ENST00000479252 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
LRRC8C-203ENST00000479252 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
LRRC8C-203ENST00000479252 KIF21BO75037 1637 aa24.82■■□□□ 1.56
LRRC8C-203ENST00000479252 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
LRRC8C-203ENST00000479252 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
LRRC8C-203ENST00000479252 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
LRRC8C-203ENST00000479252 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
LRRC8C-203ENST00000479252 URB2Q14146 1524 aaKnown RBP24.72■■□□□ 1.55
LRRC8C-203ENST00000479252 VPS8Q8N3P4 1428 aa24.71■■□□□ 1.55
LRRC8C-203ENST00000479252 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
LRRC8C-203ENST00000479252 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
LRRC8C-203ENST00000479252 FBLN2P98095 1184 aa24.65■■□□□ 1.54
LRRC8C-203ENST00000479252 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
LRRC8C-203ENST00000479252 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
LRRC8C-203ENST00000479252 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.53
LRRC8C-203ENST00000479252 KIF21AQ7Z4S6 1674 aa24.58■■□□□ 1.53
LRRC8C-203ENST00000479252 ARHGAP35Q9NRY4 1499 aa24.55■■□□□ 1.52
LRRC8C-203ENST00000479252 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
LRRC8C-203ENST00000479252 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
LRRC8C-203ENST00000479252 ERICH3Q5RHP9 1530 aa24.53■■□□□ 1.52
LRRC8C-203ENST00000479252 FHOD3Q2V2M9 1422 aa24.51■■□□□ 1.51
LRRC8C-203ENST00000479252 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
LRRC8C-203ENST00000479252 FAM50AQ14320 339 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms