RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
PCCB-214ENST00000478469 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
PCCB-214ENST00000478469 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
PCCB-214ENST00000478469 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
PCCB-214ENST00000478469 ABCC9O60706 1549 aa20.28■□□□□ 0.84
PCCB-214ENST00000478469 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
PCCB-214ENST00000478469 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.74
PCCB-214ENST00000478469 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
PCCB-214ENST00000478469 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
PCCB-214ENST00000478469 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
PCCB-214ENST00000478469 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
PCCB-214ENST00000478469 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
PCCB-214ENST00000478469 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
PCCB-214ENST00000478469 NACADO15069 1562 aa19.12■□□□□ 0.65
PCCB-214ENST00000478469 APLP2Q06481 763 aa19.04■□□□□ 0.64
PCCB-214ENST00000478469 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
PCCB-214ENST00000478469 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
PCCB-214ENST00000478469 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
PCCB-214ENST00000478469 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
PCCB-214ENST00000478469 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
PCCB-214ENST00000478469 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
PCCB-214ENST00000478469 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
PCCB-214ENST00000478469 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
PCCB-214ENST00000478469 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
PCCB-214ENST00000478469 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
PCCB-214ENST00000478469 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
PCCB-214ENST00000478469 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
PCCB-214ENST00000478469 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
PCCB-214ENST00000478469 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
PCCB-214ENST00000478469 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
PCCB-214ENST00000478469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.51
PCCB-214ENST00000478469 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.51
PCCB-214ENST00000478469 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
PCCB-214ENST00000478469 FBLN2P98095 1184 aa18.21■□□□□ 0.51
PCCB-214ENST00000478469 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
PCCB-214ENST00000478469 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
PCCB-214ENST00000478469 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
PCCB-214ENST00000478469 ITGAEP38570 1179 aa18.02■□□□□ 0.48
PCCB-214ENST00000478469 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
PCCB-214ENST00000478469 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
PCCB-214ENST00000478469 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
PCCB-214ENST00000478469 WIZO95785 1651 aa17.97■□□□□ 0.47
PCCB-214ENST00000478469 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
PCCB-214ENST00000478469 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
PCCB-214ENST00000478469 P3H3Q8IVL6 736 aa17.95■□□□□ 0.46
PCCB-214ENST00000478469 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
PCCB-214ENST00000478469 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
PCCB-214ENST00000478469 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
PCCB-214ENST00000478469 EEA1Q15075 1411 aa17.85■□□□□ 0.45
PCCB-214ENST00000478469 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
PCCB-214ENST00000478469 FAM50AQ14320 339 aaKnown RBP17.8■□□□□ 0.44
PCCB-214ENST00000478469 KIF27Q86VH2 1401 aa17.79■□□□□ 0.44
PCCB-214ENST00000478469 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
PCCB-214ENST00000478469 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
PCCB-214ENST00000478469 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
PCCB-214ENST00000478469 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
PCCB-214ENST00000478469 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
PCCB-214ENST00000478469 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
PCCB-214ENST00000478469 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
PCCB-214ENST00000478469 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
PCCB-214ENST00000478469 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
PCCB-214ENST00000478469 CLIP1P30622 1438 aa17.63■□□□□ 0.41
PCCB-214ENST00000478469 CUX2O14529 1486 aa17.63■□□□□ 0.41
PCCB-214ENST00000478469 SOGA1O94964 1423 aa17.61■□□□□ 0.41
PCCB-214ENST00000478469 CEP164Q9UPV0 1460 aa17.6■□□□□ 0.41
PCCB-214ENST00000478469 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
PCCB-214ENST00000478469 CARMIL1Q5VZK9 1371 aa17.54■□□□□ 0.4
PCCB-214ENST00000478469 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
PCCB-214ENST00000478469 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCCB-214ENST00000478469 HRCP23327 699 aa17.54■□□□□ 0.4
PCCB-214ENST00000478469 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
PCCB-214ENST00000478469 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
PCCB-214ENST00000478469 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
PCCB-214ENST00000478469 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
PCCB-214ENST00000478469 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
PCCB-214ENST00000478469 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
PCCB-214ENST00000478469 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
PCCB-214ENST00000478469 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
PCCB-214ENST00000478469 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
PCCB-214ENST00000478469 NEUROD1Q13562 356 aa17.33■□□□□ 0.37
PCCB-214ENST00000478469 CFTRP13569 1480 aa17.33■□□□□ 0.37
PCCB-214ENST00000478469 NESP48681 1621 aa17.33■□□□□ 0.37
PCCB-214ENST00000478469 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
PCCB-214ENST00000478469 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
PCCB-214ENST00000478469 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
PCCB-214ENST00000478469 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
PCCB-214ENST00000478469 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
PCCB-214ENST00000478469 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
PCCB-214ENST00000478469 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
PCCB-214ENST00000478469 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
PCCB-214ENST00000478469 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
PCCB-214ENST00000478469 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
PCCB-214ENST00000478469 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
PCCB-214ENST00000478469 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
PCCB-214ENST00000478469 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
PCCB-214ENST00000478469 CARMIL2Q6F5E8 1435 aa17.17■□□□□ 0.34
PCCB-214ENST00000478469 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
PCCB-214ENST00000478469 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
PCCB-214ENST00000478469 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
PCCB-214ENST00000478469 IGF1RP08069 1367 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms