RNA–Protein interactions for RNA: ENST00000477409.1

NCAPH-207, Transcript of non-SMC condensin I complex subunit H, humanhuman

TSL 1 (best)

Gene NCAPH, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPH-207ENST00000477409 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
NCAPH-207ENST00000477409 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
NCAPH-207ENST00000477409 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
NCAPH-207ENST00000477409 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
NCAPH-207ENST00000477409 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
NCAPH-207ENST00000477409 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
NCAPH-207ENST00000477409 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
NCAPH-207ENST00000477409 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
NCAPH-207ENST00000477409 ABCC9O60706 1549 aa18.59■□□□□ 0.57
NCAPH-207ENST00000477409 NACADO15069 1562 aa18.57■□□□□ 0.56
NCAPH-207ENST00000477409 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
NCAPH-207ENST00000477409 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
NCAPH-207ENST00000477409 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
NCAPH-207ENST00000477409 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
NCAPH-207ENST00000477409 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
NCAPH-207ENST00000477409 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
NCAPH-207ENST00000477409 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
NCAPH-207ENST00000477409 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
NCAPH-207ENST00000477409 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
NCAPH-207ENST00000477409 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
NCAPH-207ENST00000477409 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
NCAPH-207ENST00000477409 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
NCAPH-207ENST00000477409 WIZO95785 1651 aa17.59■□□□□ 0.41
NCAPH-207ENST00000477409 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.41
NCAPH-207ENST00000477409 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
NCAPH-207ENST00000477409 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
NCAPH-207ENST00000477409 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
NCAPH-207ENST00000477409 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
NCAPH-207ENST00000477409 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
NCAPH-207ENST00000477409 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
NCAPH-207ENST00000477409 TRIM41Q8WV44 630 aa17.27■□□□□ 0.35
NCAPH-207ENST00000477409 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
NCAPH-207ENST00000477409 BAZ1BQ9UIG0 1483 aaKnown RBP17.21■□□□□ 0.35
NCAPH-207ENST00000477409 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
NCAPH-207ENST00000477409 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
NCAPH-207ENST00000477409 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
NCAPH-207ENST00000477409 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
NCAPH-207ENST00000477409 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
NCAPH-207ENST00000477409 EEA1Q15075 1411 aa16.88■□□□□ 0.29
NCAPH-207ENST00000477409 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
NCAPH-207ENST00000477409 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
NCAPH-207ENST00000477409 CFTRP13569 1480 aa16.81■□□□□ 0.28
NCAPH-207ENST00000477409 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
NCAPH-207ENST00000477409 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
NCAPH-207ENST00000477409 SOGA1O94964 1423 aa16.72■□□□□ 0.27
NCAPH-207ENST00000477409 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
NCAPH-207ENST00000477409 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
NCAPH-207ENST00000477409 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
NCAPH-207ENST00000477409 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
NCAPH-207ENST00000477409 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
NCAPH-207ENST00000477409 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
NCAPH-207ENST00000477409 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
NCAPH-207ENST00000477409 CUX1P39880 1505 aa16.58■□□□□ 0.25
NCAPH-207ENST00000477409 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
NCAPH-207ENST00000477409 KIF21BO75037 1637 aa16.57■□□□□ 0.24
NCAPH-207ENST00000477409 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
NCAPH-207ENST00000477409 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
NCAPH-207ENST00000477409 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
NCAPH-207ENST00000477409 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
NCAPH-207ENST00000477409 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
NCAPH-207ENST00000477409 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
NCAPH-207ENST00000477409 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
NCAPH-207ENST00000477409 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
NCAPH-207ENST00000477409 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
NCAPH-207ENST00000477409 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
NCAPH-207ENST00000477409 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
NCAPH-207ENST00000477409 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
NCAPH-207ENST00000477409 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
NCAPH-207ENST00000477409 RAPGEF2Q9Y4G8 1499 aa16.38■□□□□ 0.21
NCAPH-207ENST00000477409 NESP48681 1621 aa16.37■□□□□ 0.21
NCAPH-207ENST00000477409 CUX2O14529 1486 aa16.34■□□□□ 0.21
NCAPH-207ENST00000477409 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
NCAPH-207ENST00000477409 CLIP1P30622 1438 aa16.32■□□□□ 0.2
NCAPH-207ENST00000477409 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
NCAPH-207ENST00000477409 IGF1RP08069 1367 aa16.28■□□□□ 0.2
NCAPH-207ENST00000477409 HRCP23327 699 aa16.28■□□□□ 0.2
NCAPH-207ENST00000477409 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.2
NCAPH-207ENST00000477409 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
NCAPH-207ENST00000477409 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
NCAPH-207ENST00000477409 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
NCAPH-207ENST00000477409 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
NCAPH-207ENST00000477409 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
NCAPH-207ENST00000477409 CUL7Q14999 1698 aa16.14■□□□□ 0.18
NCAPH-207ENST00000477409 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
NCAPH-207ENST00000477409 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
NCAPH-207ENST00000477409 APLP2Q06481 763 aa16.13■□□□□ 0.17
NCAPH-207ENST00000477409 PPARGC1BQ86YN6 1023 aaKnown RBP16.11■□□□□ 0.17
NCAPH-207ENST00000477409 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
NCAPH-207ENST00000477409 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
NCAPH-207ENST00000477409 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
NCAPH-207ENST00000477409 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
NCAPH-207ENST00000477409 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
NCAPH-207ENST00000477409 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
NCAPH-207ENST00000477409 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
NCAPH-207ENST00000477409 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
NCAPH-207ENST00000477409 WDR62O43379 1518 aa16.03■□□□□ 0.16
NCAPH-207ENST00000477409 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
NCAPH-207ENST00000477409 IFT140Q96RY7 1462 aa16■□□□□ 0.15
NCAPH-207ENST00000477409 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
NCAPH-207ENST00000477409 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms