RNA–Protein interactions for RNA: ENST00000476464.5

PSMD6-206, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 2

Gene PSMD6, Length 2,052 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-206ENST00000476464 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
PSMD6-206ENST00000476464 CCDC180Q9P1Z9 1646 aa30.89■■■□□ 2.54
PSMD6-206ENST00000476464 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
PSMD6-206ENST00000476464 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
PSMD6-206ENST00000476464 DCAF8L2P0C7V8 631 aa29.83■■■□□ 2.37
PSMD6-206ENST00000476464 DCAF1Q9Y4B6 1507 aa29.56■■■□□ 2.32
PSMD6-206ENST00000476464 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
PSMD6-206ENST00000476464 ABCC9O60706 1549 aa28.96■■■□□ 2.23
PSMD6-206ENST00000476464 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
PSMD6-206ENST00000476464 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
PSMD6-206ENST00000476464 NACADO15069 1562 aa28.69■■■□□ 2.18
PSMD6-206ENST00000476464 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
PSMD6-206ENST00000476464 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
PSMD6-206ENST00000476464 RSF1Q96T23 1441 aaPredicted RBP28.18■■■□□ 2.1
PSMD6-206ENST00000476464 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
PSMD6-206ENST00000476464 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
PSMD6-206ENST00000476464 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
PSMD6-206ENST00000476464 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
PSMD6-206ENST00000476464 WIZO95785 1651 aa27.67■■■□□ 2.02
PSMD6-206ENST00000476464 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
PSMD6-206ENST00000476464 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
PSMD6-206ENST00000476464 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
PSMD6-206ENST00000476464 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
PSMD6-206ENST00000476464 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
PSMD6-206ENST00000476464 LOC105371045A0A1W2PR82 267 aa27.26■■□□□ 1.95
PSMD6-206ENST00000476464 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
PSMD6-206ENST00000476464 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
PSMD6-206ENST00000476464 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.93
PSMD6-206ENST00000476464 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
PSMD6-206ENST00000476464 FAM9AQ8IZU1 332 aaPredicted RBP27.01■■□□□ 1.91
PSMD6-206ENST00000476464 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
PSMD6-206ENST00000476464 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
PSMD6-206ENST00000476464 ABCC8Q09428 1581 aa26.83■■□□□ 1.88
PSMD6-206ENST00000476464 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
PSMD6-206ENST00000476464 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
PSMD6-206ENST00000476464 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
PSMD6-206ENST00000476464 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
PSMD6-206ENST00000476464 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
PSMD6-206ENST00000476464 SOGA1O94964 1423 aa26.46■■□□□ 1.83
PSMD6-206ENST00000476464 TRIM26Q12899 539 aaPredicted RBP26.4■■□□□ 1.82
PSMD6-206ENST00000476464 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
PSMD6-206ENST00000476464 EEA1Q15075 1411 aa26.36■■□□□ 1.81
PSMD6-206ENST00000476464 HRCP23327 699 aa26.33■■□□□ 1.81
PSMD6-206ENST00000476464 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
PSMD6-206ENST00000476464 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
PSMD6-206ENST00000476464 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
PSMD6-206ENST00000476464 TNIKQ9UKE5 1360 aa26.14■■□□□ 1.77
PSMD6-206ENST00000476464 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
PSMD6-206ENST00000476464 CFTRP13569 1480 aa26.13■■□□□ 1.77
PSMD6-206ENST00000476464 CEP162Q5TB80 1403 aa26.12■■□□□ 1.77
PSMD6-206ENST00000476464 CC2D2AQ9P2K1 1620 aa26.12■■□□□ 1.77
PSMD6-206ENST00000476464 GOLGA3Q08378 1498 aa26.11■■□□□ 1.77
PSMD6-206ENST00000476464 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
PSMD6-206ENST00000476464 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
PSMD6-206ENST00000476464 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
PSMD6-206ENST00000476464 KIF21BO75037 1637 aa26■■□□□ 1.75
PSMD6-206ENST00000476464 CUX1P39880 1505 aa25.99■■□□□ 1.75
PSMD6-206ENST00000476464 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
PSMD6-206ENST00000476464 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
PSMD6-206ENST00000476464 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
PSMD6-206ENST00000476464 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
PSMD6-206ENST00000476464 CLIP1P30622 1438 aa25.77■■□□□ 1.72
PSMD6-206ENST00000476464 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
PSMD6-206ENST00000476464 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
PSMD6-206ENST00000476464 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
PSMD6-206ENST00000476464 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
PSMD6-206ENST00000476464 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
PSMD6-206ENST00000476464 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
PSMD6-206ENST00000476464 NESP48681 1621 aa25.62■■□□□ 1.69
PSMD6-206ENST00000476464 CUX2O14529 1486 aa25.62■■□□□ 1.69
PSMD6-206ENST00000476464 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
PSMD6-206ENST00000476464 VPS8Q8N3P4 1428 aa25.59■■□□□ 1.69
PSMD6-206ENST00000476464 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
PSMD6-206ENST00000476464 IGF1RP08069 1367 aa25.5■■□□□ 1.67
PSMD6-206ENST00000476464 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
PSMD6-206ENST00000476464 APLP2Q06481 763 aa25.47■■□□□ 1.67
PSMD6-206ENST00000476464 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
PSMD6-206ENST00000476464 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
PSMD6-206ENST00000476464 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
PSMD6-206ENST00000476464 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
PSMD6-206ENST00000476464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
PSMD6-206ENST00000476464 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.66
PSMD6-206ENST00000476464 RAD54L2Q9Y4B4 1467 aa25.39■■□□□ 1.66
PSMD6-206ENST00000476464 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
PSMD6-206ENST00000476464 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
PSMD6-206ENST00000476464 ABCA10Q8WWZ4 1543 aa25.34■■□□□ 1.65
PSMD6-206ENST00000476464 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
PSMD6-206ENST00000476464 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
PSMD6-206ENST00000476464 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
PSMD6-206ENST00000476464 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
PSMD6-206ENST00000476464 WDR97A6NE52 1622 aa25.14■■□□□ 1.62
PSMD6-206ENST00000476464 CUL7Q14999 1698 aa25.14■■□□□ 1.61
PSMD6-206ENST00000476464 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
PSMD6-206ENST00000476464 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
PSMD6-206ENST00000476464 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
PSMD6-206ENST00000476464 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
PSMD6-206ENST00000476464 P3H3Q8IVL6 736 aa25.01■■□□□ 1.59
PSMD6-206ENST00000476464 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
PSMD6-206ENST00000476464 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
PSMD6-206ENST00000476464 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms