RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
TOP2B-206ENST00000475717 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
TOP2B-206ENST00000475717 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
TOP2B-206ENST00000475717 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
TOP2B-206ENST00000475717 FOXD1Q16676 465 aa20.3■□□□□ 0.84
TOP2B-206ENST00000475717 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
TOP2B-206ENST00000475717 ADRA2BP18089 450 aa19.23■□□□□ 0.67
TOP2B-206ENST00000475717 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
TOP2B-206ENST00000475717 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
TOP2B-206ENST00000475717 MSH5O43196 834 aa18.85■□□□□ 0.61
TOP2B-206ENST00000475717 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
TOP2B-206ENST00000475717 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
TOP2B-206ENST00000475717 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
TOP2B-206ENST00000475717 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
TOP2B-206ENST00000475717 DMRT2Q9Y5R5 561 aa17.34■□□□□ 0.37
TOP2B-206ENST00000475717 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
TOP2B-206ENST00000475717 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
TOP2B-206ENST00000475717 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
TOP2B-206ENST00000475717 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
TOP2B-206ENST00000475717 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
TOP2B-206ENST00000475717 KCNA4P22459 653 aa16.67■□□□□ 0.26
TOP2B-206ENST00000475717 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
TOP2B-206ENST00000475717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.175e-9■□□□□ 9.7
TOP2B-206ENST00000475717 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
TOP2B-206ENST00000475717 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
TOP2B-206ENST00000475717 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
TOP2B-206ENST00000475717 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
TOP2B-206ENST00000475717 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
TOP2B-206ENST00000475717 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
TOP2B-206ENST00000475717 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
TOP2B-206ENST00000475717 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
TOP2B-206ENST00000475717 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
TOP2B-206ENST00000475717 CAPN15O75808 1086 aa15.46■□□□□ 0.07
TOP2B-206ENST00000475717 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
TOP2B-206ENST00000475717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
TOP2B-206ENST00000475717 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
TOP2B-206ENST00000475717 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
TOP2B-206ENST00000475717 APLP2Q06481 763 aa15.38■□□□□ 0.05
TOP2B-206ENST00000475717 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
TOP2B-206ENST00000475717 ZBTB22O15209 634 aa15.32■□□□□ 0.04
TOP2B-206ENST00000475717 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
TOP2B-206ENST00000475717 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
TOP2B-206ENST00000475717 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
TOP2B-206ENST00000475717 DSG3P32926 999 aa15.21■□□□□ 0.03
TOP2B-206ENST00000475717 ABCB7O75027 752 aa15.15■□□□□ 0.02
TOP2B-206ENST00000475717 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
TOP2B-206ENST00000475717 POLA2Q14181 598 aa14.92□□□□□ -0.02
TOP2B-206ENST00000475717 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
TOP2B-206ENST00000475717 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
TOP2B-206ENST00000475717 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
TOP2B-206ENST00000475717 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
TOP2B-206ENST00000475717 FBLN2P98095 1184 aa14.45□□□□□ -0.1
TOP2B-206ENST00000475717 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
TOP2B-206ENST00000475717 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
TOP2B-206ENST00000475717 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
TOP2B-206ENST00000475717 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
TOP2B-206ENST00000475717 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
TOP2B-206ENST00000475717 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
TOP2B-206ENST00000475717 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
TOP2B-206ENST00000475717 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
TOP2B-206ENST00000475717 POTEHQ6S545 545 aa14.06□□□□□ -0.16
TOP2B-206ENST00000475717 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
TOP2B-206ENST00000475717 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
TOP2B-206ENST00000475717 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
TOP2B-206ENST00000475717 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
TOP2B-206ENST00000475717 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
TOP2B-206ENST00000475717 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
TOP2B-206ENST00000475717 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
TOP2B-206ENST00000475717 FKBP8Q14318 412 aa13.77□□□□□ -0.21
TOP2B-206ENST00000475717 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.212e-8■■■■□ 24.5
TOP2B-206ENST00000475717 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
TOP2B-206ENST00000475717 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
TOP2B-206ENST00000475717 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
TOP2B-206ENST00000475717 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
TOP2B-206ENST00000475717 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
TOP2B-206ENST00000475717 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
TOP2B-206ENST00000475717 HAX1O00165 279 aa13.51□□□□□ -0.25
TOP2B-206ENST00000475717 PROM2Q8N271 834 aa13.51□□□□□ -0.25
TOP2B-206ENST00000475717 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
TOP2B-206ENST00000475717 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
TOP2B-206ENST00000475717 EVX2Q03828 476 aa13.33□□□□□ -0.28
TOP2B-206ENST00000475717 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-206ENST00000475717 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
TOP2B-206ENST00000475717 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
TOP2B-206ENST00000475717 MIER1Q8N108 512 aa13.21□□□□□ -0.29
TOP2B-206ENST00000475717 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
TOP2B-206ENST00000475717 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
TOP2B-206ENST00000475717 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
TOP2B-206ENST00000475717 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
TOP2B-206ENST00000475717 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
TOP2B-206ENST00000475717 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
TOP2B-206ENST00000475717 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
TOP2B-206ENST00000475717 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
TOP2B-206ENST00000475717 GABBR2O75899 941 aa13.05□□□□□ -0.32
TOP2B-206ENST00000475717 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
TOP2B-206ENST00000475717 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
TOP2B-206ENST00000475717 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
TOP2B-206ENST00000475717 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
TOP2B-206ENST00000475717 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
TOP2B-206ENST00000475717 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms