RNA–Protein interactions for RNA: ENST00000475336.5

TNIK-211, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-211ENST00000475336 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
TNIK-211ENST00000475336 PCGF6Q9BYE7 350 aa16.24■□□□□ 0.19
TNIK-211ENST00000475336 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
TNIK-211ENST00000475336 HRCP23327 699 aa16.01■□□□□ 0.15
TNIK-211ENST00000475336 SUPT5HO00267 1087 aaKnown RBP15.85■□□□□ 0.13
TNIK-211ENST00000475336 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
TNIK-211ENST00000475336 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
TNIK-211ENST00000475336 MYT1Q01538 1121 aa15.54■□□□□ 0.08
TNIK-211ENST00000475336 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.07
TNIK-211ENST00000475336 YTHDC1Q96MU7 727 aaKnown RBP15.49■□□□□ 0.07
TNIK-211ENST00000475336 GTF3C3Q9Y5Q9 886 aa15.39■□□□□ 0.05
TNIK-211ENST00000475336 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.02
TNIK-211ENST00000475336 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
TNIK-211ENST00000475336 LOC105371045A0A1W2PR82 267 aa15.15■□□□□ 0.02
TNIK-211ENST00000475336 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
TNIK-211ENST00000475336 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
TNIK-211ENST00000475336 BCL11AQ9H165 835 aa15.07■□□□□ 0
TNIK-211ENST00000475336 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
TNIK-211ENST00000475336 FAM9AQ8IZU1 332 aaPredicted RBP14.98□□□□□ -0.01
TNIK-211ENST00000475336 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
TNIK-211ENST00000475336 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
TNIK-211ENST00000475336 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
TNIK-211ENST00000475336 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
TNIK-211ENST00000475336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
TNIK-211ENST00000475336 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
TNIK-211ENST00000475336 BCANQ96GW7 911 aa14.79□□□□□ -0.04
TNIK-211ENST00000475336 ZEB1P37275 1124 aaPredicted RBP14.77□□□□□ -0.05
TNIK-211ENST00000475336 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
TNIK-211ENST00000475336 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
TNIK-211ENST00000475336 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
TNIK-211ENST00000475336 ERICH6Q7L0X2 663 aa14.63□□□□□ -0.07
TNIK-211ENST00000475336 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.09
TNIK-211ENST00000475336 CCDC136Q96JN2 1154 aa14.44□□□□□ -0.1
TNIK-211ENST00000475336 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
TNIK-211ENST00000475336 ITGAEP38570 1179 aa14.34□□□□□ -0.11
TNIK-211ENST00000475336 MIER1Q8N108 512 aa14.34□□□□□ -0.11
TNIK-211ENST00000475336 ANO8Q9HCE9 1232 aaPredicted RBP14.32□□□□□ -0.12
TNIK-211ENST00000475336 EIF5BO60841 1220 aaKnown RBP14.31□□□□□ -0.12
TNIK-211ENST00000475336 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
TNIK-211ENST00000475336 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
TNIK-211ENST00000475336 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
TNIK-211ENST00000475336 NBR1Q14596 966 aa14.23□□□□□ -0.13
TNIK-211ENST00000475336 TSHZ2Q9NRE2 1034 aa14.2□□□□□ -0.14
TNIK-211ENST00000475336 RANGAP1P46060 587 aaPredicted RBP14.17□□□□□ -0.14
TNIK-211ENST00000475336 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
TNIK-211ENST00000475336 FKBP8Q14318 412 aa14.14□□□□□ -0.15
TNIK-211ENST00000475336 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
TNIK-211ENST00000475336 NEFLP07196 543 aa14.13□□□□□ -0.15
TNIK-211ENST00000475336 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
TNIK-211ENST00000475336 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
TNIK-211ENST00000475336 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
TNIK-211ENST00000475336 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
TNIK-211ENST00000475336 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
TNIK-211ENST00000475336 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
TNIK-211ENST00000475336 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
TNIK-211ENST00000475336 APLP2Q06481 763 aa13.92□□□□□ -0.18
TNIK-211ENST00000475336 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
TNIK-211ENST00000475336 RTL5Q5HYW3 569 aaPredicted RBP13.9□□□□□ -0.18
TNIK-211ENST00000475336 KCNH8Q96L42 1107 aa13.82□□□□□ -0.2
TNIK-211ENST00000475336 NPM2Q86SE8 214 aaKnown RBP13.79□□□□□ -0.2
TNIK-211ENST00000475336 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
TNIK-211ENST00000475336 IL27Q8NEV9 243 aa13.77□□□□□ -0.2
TNIK-211ENST00000475336 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
TNIK-211ENST00000475336 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
TNIK-211ENST00000475336 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
TNIK-211ENST00000475336 MSH5O43196 834 aa13.71□□□□□ -0.21
TNIK-211ENST00000475336 ARXQ96QS3 562 aa13.71□□□□□ -0.21
TNIK-211ENST00000475336 UBTFP17480 764 aaKnown RBP13.7□□□□□ -0.22
TNIK-211ENST00000475336 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
TNIK-211ENST00000475336 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
TNIK-211ENST00000475336 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
TNIK-211ENST00000475336 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
TNIK-211ENST00000475336 A0A0U1RQG5 324 aaPredicted RBP13.56□□□□□ -0.24
TNIK-211ENST00000475336 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
TNIK-211ENST00000475336 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
TNIK-211ENST00000475336 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
TNIK-211ENST00000475336 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNIK-211ENST00000475336 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
TNIK-211ENST00000475336 ZBTB47Q9UFB7 747 aaPredicted RBP13.46□□□□□ -0.25
TNIK-211ENST00000475336 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.26
TNIK-211ENST00000475336 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
TNIK-211ENST00000475336 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
TNIK-211ENST00000475336 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
TNIK-211ENST00000475336 NEFMP07197 916 aa13.42□□□□□ -0.26
TNIK-211ENST00000475336 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
TNIK-211ENST00000475336 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
TNIK-211ENST00000475336 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
TNIK-211ENST00000475336 ARID3AQ99856 593 aa13.37□□□□□ -0.27
TNIK-211ENST00000475336 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
TNIK-211ENST00000475336 UBE2Q2Q8WVN8 375 aa13.36□□□□□ -0.27
TNIK-211ENST00000475336 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
TNIK-211ENST00000475336 ANP32CO43423 234 aa13.34□□□□□ -0.27
TNIK-211ENST00000475336 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
TNIK-211ENST00000475336 FAM9BQ8IZU0 186 aa13.33□□□□□ -0.28
TNIK-211ENST00000475336 GLIPR1L2Q4G1C9 344 aa13.31□□□□□ -0.28
TNIK-211ENST00000475336 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
TNIK-211ENST00000475336 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
TNIK-211ENST00000475336 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
TNIK-211ENST00000475336 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
TNIK-211ENST00000475336 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms