RNA–Protein interactions for RNA: ENST00000474234.5

ZC3H8-205, Transcript of zinc finger CCCH-type containing 8, humanhuman

TSL 5

Gene ZC3H8, Length 847 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-205ENST00000474234 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
ZC3H8-205ENST00000474234 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
ZC3H8-205ENST00000474234 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
ZC3H8-205ENST00000474234 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
ZC3H8-205ENST00000474234 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
ZC3H8-205ENST00000474234 FOXD1Q16676 465 aa17.35■□□□□ 0.37
ZC3H8-205ENST00000474234 ADRA2BP18089 450 aa16.74■□□□□ 0.27
ZC3H8-205ENST00000474234 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
ZC3H8-205ENST00000474234 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
ZC3H8-205ENST00000474234 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
ZC3H8-205ENST00000474234 MSH5O43196 834 aa16.33■□□□□ 0.2
ZC3H8-205ENST00000474234 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
ZC3H8-205ENST00000474234 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
ZC3H8-205ENST00000474234 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
ZC3H8-205ENST00000474234 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
ZC3H8-205ENST00000474234 KCNA4P22459 653 aa15.13■□□□□ 0.01
ZC3H8-205ENST00000474234 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
ZC3H8-205ENST00000474234 CNKSR2Q8WXI2 1034 aa14.96□□□□□ -0.01
ZC3H8-205ENST00000474234 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
ZC3H8-205ENST00000474234 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
ZC3H8-205ENST00000474234 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
ZC3H8-205ENST00000474234 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
ZC3H8-205ENST00000474234 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
ZC3H8-205ENST00000474234 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
ZC3H8-205ENST00000474234 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
ZC3H8-205ENST00000474234 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
ZC3H8-205ENST00000474234 ABCC9O60706 1549 aa14.22□□□□□ -0.13
ZC3H8-205ENST00000474234 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
ZC3H8-205ENST00000474234 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
ZC3H8-205ENST00000474234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.175e-7■□□□□ 9.5
ZC3H8-205ENST00000474234 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
ZC3H8-205ENST00000474234 ZBTB22O15209 634 aa13.91□□□□□ -0.18
ZC3H8-205ENST00000474234 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
ZC3H8-205ENST00000474234 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
ZC3H8-205ENST00000474234 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
ZC3H8-205ENST00000474234 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
ZC3H8-205ENST00000474234 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
ZC3H8-205ENST00000474234 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
ZC3H8-205ENST00000474234 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
ZC3H8-205ENST00000474234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
ZC3H8-205ENST00000474234 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
ZC3H8-205ENST00000474234 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
ZC3H8-205ENST00000474234 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
ZC3H8-205ENST00000474234 NACADO15069 1562 aa13.46□□□□□ -0.25
ZC3H8-205ENST00000474234 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
ZC3H8-205ENST00000474234 APLP2Q06481 763 aa13.36□□□□□ -0.27
ZC3H8-205ENST00000474234 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
ZC3H8-205ENST00000474234 CAPN15O75808 1086 aa13.34□□□□□ -0.27
ZC3H8-205ENST00000474234 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
ZC3H8-205ENST00000474234 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
ZC3H8-205ENST00000474234 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
ZC3H8-205ENST00000474234 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZC3H8-205ENST00000474234 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
ZC3H8-205ENST00000474234 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
ZC3H8-205ENST00000474234 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
ZC3H8-205ENST00000474234 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
ZC3H8-205ENST00000474234 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
ZC3H8-205ENST00000474234 ABCB7O75027 752 aa13.12□□□□□ -0.31
ZC3H8-205ENST00000474234 DSG3P32926 999 aa13.04□□□□□ -0.32
ZC3H8-205ENST00000474234 POLA2Q14181 598 aa13.04□□□□□ -0.32
ZC3H8-205ENST00000474234 POTEHQ6S545 545 aa13□□□□□ -0.33
ZC3H8-205ENST00000474234 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
ZC3H8-205ENST00000474234 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
ZC3H8-205ENST00000474234 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
ZC3H8-205ENST00000474234 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
ZC3H8-205ENST00000474234 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
ZC3H8-205ENST00000474234 FBLN2P98095 1184 aa12.77□□□□□ -0.37
ZC3H8-205ENST00000474234 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
ZC3H8-205ENST00000474234 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
ZC3H8-205ENST00000474234 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
ZC3H8-205ENST00000474234 FKBP8Q14318 412 aa12.57□□□□□ -0.4
ZC3H8-205ENST00000474234 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
ZC3H8-205ENST00000474234 NCAPD3P42695 1498 aa12.46□□□□□ -0.42
ZC3H8-205ENST00000474234 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
ZC3H8-205ENST00000474234 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
ZC3H8-205ENST00000474234 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
ZC3H8-205ENST00000474234 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
ZC3H8-205ENST00000474234 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
ZC3H8-205ENST00000474234 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
ZC3H8-205ENST00000474234 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
ZC3H8-205ENST00000474234 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
ZC3H8-205ENST00000474234 BAZ1AQ9NRL2 1556 aaPredicted RBP12.36□□□□□ -0.43
ZC3H8-205ENST00000474234 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
ZC3H8-205ENST00000474234 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
ZC3H8-205ENST00000474234 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
ZC3H8-205ENST00000474234 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
ZC3H8-205ENST00000474234 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
ZC3H8-205ENST00000474234 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
ZC3H8-205ENST00000474234 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
ZC3H8-205ENST00000474234 NESP48681 1621 aa12.24□□□□□ -0.45
ZC3H8-205ENST00000474234 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
ZC3H8-205ENST00000474234 CUX2O14529 1486 aa12.2□□□□□ -0.46
ZC3H8-205ENST00000474234 PROM2Q8N271 834 aa12.18□□□□□ -0.46
ZC3H8-205ENST00000474234 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
ZC3H8-205ENST00000474234 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
ZC3H8-205ENST00000474234 WIZO95785 1651 aa12.14□□□□□ -0.47
ZC3H8-205ENST00000474234 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
ZC3H8-205ENST00000474234 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
ZC3H8-205ENST00000474234 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
ZC3H8-205ENST00000474234 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms