RNA–Protein interactions for RNA: ENST00000473078.1

CDK6-204, Transcript of cyclin dependent kinase 6, humanhuman

TSL 2

Gene CDK6, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-204ENST00000473078 PTBP1P26599 531 aaKnown RBP eCLIP1.82□□□□□ -2.125e-7■■■■■ 218.9
CDK6-204ENST00000473078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.2□□□□□ -1.93e-9■■■■■ 166.1
CDK6-204ENST00000473078 PCBP2Q15366 365 aaKnown RBP eCLIP2.05□□□□□ -2.081e-21■■■■■ 113.1
CDK6-204ENST00000473078 FMR1Q06787 632 aaKnown RBP eCLIP2.79□□□□□ -1.962e-8■■■■■ 68.9
CDK6-204ENST00000473078 SF3B1O75533 1304 aaKnown RBP eCLIP1.66□□□□□ -2.143e-6■■■■■ 56.8
CDK6-204ENST00000473078 HNRNPLP14866 589 aaKnown RBP eCLIP2.14□□□□□ -2.077e-14■■■■■ 46
CDK6-204ENST00000473078 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.65□□□□□ -1.994e-7■■■■■ 33.6
CDK6-204ENST00000473078 TARDBPQ13148 414 aaKnown RBP eCLIP1.96□□□□□ -2.14e-9■■■■■ 29.6
CDK6-204ENST00000473078 EFTUD2Q15029 972 aaKnown RBP eCLIP1.83□□□□□ -2.125e-7■■■■□ 26.2
CDK6-204ENST00000473078 CSTF2P33240 577 aaKnown RBP eCLIP1.94□□□□□ -2.14e-7■■■■□ 25.6
CDK6-204ENST00000473078 TIAL1Q01085 375 aaKnown RBP eCLIP1.82□□□□□ -2.129e-7■■■■□ 23.8
CDK6-204ENST00000473078 ILF3Q12906 894 aaKnown RBP eCLIP1.54□□□□□ -2.168e-13■■■■□ 23.1
CDK6-204ENST00000473078 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.79□□□□□ -1.963e-6■■■■□ 22.2
CDK6-204ENST00000473078 QKIQ96PU8 341 aaKnown RBP eCLIP1.47□□□□□ -2.175e-7■■■■□ 19.5
CDK6-204ENST00000473078 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.07□□□□□ -2.081e-6■■■□□ 16.5
CDK6-204ENST00000473078 MATR3P43243 847 aaKnown RBP eCLIP1.88□□□□□ -2.111e-7■■■□□ 16.1
CDK6-204ENST00000473078 HNRNPKP61978 463 aaKnown RBP eCLIP1.74□□□□□ -2.132e-6■■□□□ 13.9
CDK6-204ENST00000473078 AQRO60306 1485 aaKnown RBP eCLIP3.53□□□□□ -1.843e-6■■□□□ 13.8
CDK6-204ENST00000473078 CDC40O60508 579 aaKnown RBP eCLIP1.48□□□□□ -2.172e-8■■□□□ 13.4
CDK6-204ENST00000473078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.81□□□□□ -1.643e-6■■□□□ 13.4
CDK6-204ENST00000473078 KHSRPQ92945 711 aaKnown RBP eCLIP4.64□□□□□ -1.673e-6■■□□□ 12.7
CDK6-204ENST00000473078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.23□□□□□ -2.054e-6■■□□□ 11.7
CDK6-204ENST00000473078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.84□□□□□ -1.313e-15■■□□□ 11.4
CDK6-204ENST00000473078 U2AF2P26368 475 aaKnown RBP eCLIP1.82□□□□□ -2.123e-7■□□□□ 10.7
CDK6-204ENST00000473078 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.84□□□□□ -2.118e-6■□□□□ 10.3
CDK6-204ENST00000473078 SFPQP23246 707 aaKnown RBP eCLIP1.84□□□□□ -2.119e-8■□□□□ 10
CDK6-204ENST00000473078 PPIGQ13427 754 aaKnown RBP eCLIP1.9□□□□□ -2.118e-8■□□□□ 9
CDK6-204ENST00000473078 YBX3P16989 372 aaKnown RBP eCLIP3.23□□□□□ -1.891e-12■□□□□ 8.4
Retrieved 28 of 28 RNA–protein pairs in 6.5 ms