RNA–Protein interactions for RNA: ENST00000472989.5

TM2D1-207, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 531 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-207ENST00000472989 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
TM2D1-207ENST00000472989 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
TM2D1-207ENST00000472989 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
TM2D1-207ENST00000472989 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
TM2D1-207ENST00000472989 FOXD1Q16676 465 aa21.59■■□□□ 1.05
TM2D1-207ENST00000472989 POTEDQ86YR6 584 aa21.12■□□□□ 0.97
TM2D1-207ENST00000472989 MSH5O43196 834 aa20.41■□□□□ 0.86
TM2D1-207ENST00000472989 PIAS4Q8N2W9 510 aaPredicted RBP20.02■□□□□ 0.8
TM2D1-207ENST00000472989 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
TM2D1-207ENST00000472989 ADRA2BP18089 450 aa19.62■□□□□ 0.73
TM2D1-207ENST00000472989 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
TM2D1-207ENST00000472989 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
TM2D1-207ENST00000472989 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
TM2D1-207ENST00000472989 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
TM2D1-207ENST00000472989 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
TM2D1-207ENST00000472989 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
TM2D1-207ENST00000472989 RNF39Q9H2S5 420 aa17.35■□□□□ 0.37
TM2D1-207ENST00000472989 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
TM2D1-207ENST00000472989 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
TM2D1-207ENST00000472989 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
TM2D1-207ENST00000472989 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
TM2D1-207ENST00000472989 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
TM2D1-207ENST00000472989 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
TM2D1-207ENST00000472989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
TM2D1-207ENST00000472989 POTEHQ6S545 545 aa16.42■□□□□ 0.22
TM2D1-207ENST00000472989 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
TM2D1-207ENST00000472989 CAPN15O75808 1086 aa16.07■□□□□ 0.16
TM2D1-207ENST00000472989 DSG3P32926 999 aa16.06■□□□□ 0.16
TM2D1-207ENST00000472989 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
TM2D1-207ENST00000472989 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
TM2D1-207ENST00000472989 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
TM2D1-207ENST00000472989 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
TM2D1-207ENST00000472989 ABCB7O75027 752 aa15.64■□□□□ 0.09
TM2D1-207ENST00000472989 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
TM2D1-207ENST00000472989 APLP2Q06481 763 aa15.47■□□□□ 0.07
TM2D1-207ENST00000472989 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
TM2D1-207ENST00000472989 KCNA4P22459 653 aa15.44■□□□□ 0.06
TM2D1-207ENST00000472989 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
TM2D1-207ENST00000472989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
TM2D1-207ENST00000472989 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
TM2D1-207ENST00000472989 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
TM2D1-207ENST00000472989 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
TM2D1-207ENST00000472989 POLA2Q14181 598 aa15.06■□□□□ 0
TM2D1-207ENST00000472989 SP7Q8TDD2 431 aaPredicted RBP15.06■□□□□ 0
TM2D1-207ENST00000472989 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
TM2D1-207ENST00000472989 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
TM2D1-207ENST00000472989 HAX1O00165 279 aa14.77□□□□□ -0.05
TM2D1-207ENST00000472989 PIP4P2Q8N4L2 257 aa14.77□□□□□ -0.05
TM2D1-207ENST00000472989 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
TM2D1-207ENST00000472989 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
TM2D1-207ENST00000472989 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
TM2D1-207ENST00000472989 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
TM2D1-207ENST00000472989 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
TM2D1-207ENST00000472989 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
TM2D1-207ENST00000472989 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
TM2D1-207ENST00000472989 EVX2Q03828 476 aa14.5□□□□□ -0.09
TM2D1-207ENST00000472989 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
TM2D1-207ENST00000472989 ZBTB22O15209 634 aa14.23□□□□□ -0.13
TM2D1-207ENST00000472989 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
TM2D1-207ENST00000472989 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
TM2D1-207ENST00000472989 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
TM2D1-207ENST00000472989 LHX8Q68G74 356 aa14.16□□□□□ -0.14
TM2D1-207ENST00000472989 GABBR2O75899 941 aa14.12□□□□□ -0.15
TM2D1-207ENST00000472989 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
TM2D1-207ENST00000472989 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
TM2D1-207ENST00000472989 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
TM2D1-207ENST00000472989 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
TM2D1-207ENST00000472989 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
TM2D1-207ENST00000472989 FBLN2P98095 1184 aa14.02□□□□□ -0.17
TM2D1-207ENST00000472989 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
TM2D1-207ENST00000472989 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
TM2D1-207ENST00000472989 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
TM2D1-207ENST00000472989 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
TM2D1-207ENST00000472989 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
TM2D1-207ENST00000472989 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
TM2D1-207ENST00000472989 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
TM2D1-207ENST00000472989 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
TM2D1-207ENST00000472989 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
TM2D1-207ENST00000472989 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
TM2D1-207ENST00000472989 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
TM2D1-207ENST00000472989 CLCN6P51797 869 aa13.57□□□□□ -0.24
TM2D1-207ENST00000472989 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
TM2D1-207ENST00000472989 OTUD5Q96G74 571 aa13.42□□□□□ -0.26
TM2D1-207ENST00000472989 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
TM2D1-207ENST00000472989 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
TM2D1-207ENST00000472989 POTEMA6NI47 508 aa13.36□□□□□ -0.27
TM2D1-207ENST00000472989 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
TM2D1-207ENST00000472989 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
TM2D1-207ENST00000472989 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
TM2D1-207ENST00000472989 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
TM2D1-207ENST00000472989 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
TM2D1-207ENST00000472989 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
TM2D1-207ENST00000472989 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
TM2D1-207ENST00000472989 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
TM2D1-207ENST00000472989 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
TM2D1-207ENST00000472989 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
TM2D1-207ENST00000472989 METRNQ9UJH8 293 aa13.05□□□□□ -0.32
TM2D1-207ENST00000472989 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
TM2D1-207ENST00000472989 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
TM2D1-207ENST00000472989 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms