RNA–Protein interactions for RNA: ENST00000472637.5

NEPRO-211, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 1 (best)

Gene NEPRO, Length 2,179 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-211ENST00000472637 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
NEPRO-211ENST00000472637 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.89
NEPRO-211ENST00000472637 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.81
NEPRO-211ENST00000472637 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
NEPRO-211ENST00000472637 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.73
NEPRO-211ENST00000472637 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
NEPRO-211ENST00000472637 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
NEPRO-211ENST00000472637 ABCC9O60706 1549 aa25.2■■□□□ 1.62
NEPRO-211ENST00000472637 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
NEPRO-211ENST00000472637 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
NEPRO-211ENST00000472637 NACADO15069 1562 aa24.95■■□□□ 1.58
NEPRO-211ENST00000472637 RB1CC1Q8TDY2 1594 aa24.62■■□□□ 1.53
NEPRO-211ENST00000472637 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
NEPRO-211ENST00000472637 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
NEPRO-211ENST00000472637 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
NEPRO-211ENST00000472637 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
NEPRO-211ENST00000472637 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
NEPRO-211ENST00000472637 WIZO95785 1651 aa24.13■■□□□ 1.45
NEPRO-211ENST00000472637 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
NEPRO-211ENST00000472637 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
NEPRO-211ENST00000472637 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
NEPRO-211ENST00000472637 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
NEPRO-211ENST00000472637 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
NEPRO-211ENST00000472637 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
NEPRO-211ENST00000472637 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
NEPRO-211ENST00000472637 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
NEPRO-211ENST00000472637 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
NEPRO-211ENST00000472637 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
NEPRO-211ENST00000472637 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
NEPRO-211ENST00000472637 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
NEPRO-211ENST00000472637 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
NEPRO-211ENST00000472637 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
NEPRO-211ENST00000472637 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
NEPRO-211ENST00000472637 EHMT2Q96KQ7 1210 aa23.24■■□□□ 1.31
NEPRO-211ENST00000472637 PCGF6Q9BYE7 350 aa23.21■■□□□ 1.31
NEPRO-211ENST00000472637 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
NEPRO-211ENST00000472637 SOGA1O94964 1423 aa23.06■■□□□ 1.28
NEPRO-211ENST00000472637 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
NEPRO-211ENST00000472637 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
NEPRO-211ENST00000472637 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
NEPRO-211ENST00000472637 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
NEPRO-211ENST00000472637 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
NEPRO-211ENST00000472637 HRCP23327 699 aa22.9■■□□□ 1.26
NEPRO-211ENST00000472637 EEA1Q15075 1411 aa22.88■■□□□ 1.25
NEPRO-211ENST00000472637 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
NEPRO-211ENST00000472637 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
NEPRO-211ENST00000472637 CFTRP13569 1480 aa22.76■■□□□ 1.23
NEPRO-211ENST00000472637 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
NEPRO-211ENST00000472637 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
NEPRO-211ENST00000472637 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
NEPRO-211ENST00000472637 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
NEPRO-211ENST00000472637 GOLGA3Q08378 1498 aa22.68■■□□□ 1.22
NEPRO-211ENST00000472637 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
NEPRO-211ENST00000472637 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
NEPRO-211ENST00000472637 CUX1P39880 1505 aa22.65■■□□□ 1.22
NEPRO-211ENST00000472637 KIF21BO75037 1637 aa22.62■■□□□ 1.21
NEPRO-211ENST00000472637 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
NEPRO-211ENST00000472637 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
NEPRO-211ENST00000472637 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
NEPRO-211ENST00000472637 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
NEPRO-211ENST00000472637 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
NEPRO-211ENST00000472637 CLIP1P30622 1438 aa22.39■■□□□ 1.17
NEPRO-211ENST00000472637 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
NEPRO-211ENST00000472637 TTBK1Q5TCY1 1321 aaPredicted RBP22.35■■□□□ 1.17
NEPRO-211ENST00000472637 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
NEPRO-211ENST00000472637 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
NEPRO-211ENST00000472637 NESP48681 1621 aa22.34■■□□□ 1.17
NEPRO-211ENST00000472637 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
NEPRO-211ENST00000472637 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
NEPRO-211ENST00000472637 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
NEPRO-211ENST00000472637 CUX2O14529 1486 aa22.26■■□□□ 1.15
NEPRO-211ENST00000472637 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
NEPRO-211ENST00000472637 IGF1RP08069 1367 aa22.22■■□□□ 1.15
NEPRO-211ENST00000472637 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
NEPRO-211ENST00000472637 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
NEPRO-211ENST00000472637 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
NEPRO-211ENST00000472637 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
NEPRO-211ENST00000472637 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
NEPRO-211ENST00000472637 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
NEPRO-211ENST00000472637 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
NEPRO-211ENST00000472637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
NEPRO-211ENST00000472637 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.13
NEPRO-211ENST00000472637 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
NEPRO-211ENST00000472637 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
NEPRO-211ENST00000472637 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
NEPRO-211ENST00000472637 APLP2Q06481 763 aa22.01■■□□□ 1.11
NEPRO-211ENST00000472637 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
NEPRO-211ENST00000472637 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
NEPRO-211ENST00000472637 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
NEPRO-211ENST00000472637 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
NEPRO-211ENST00000472637 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
NEPRO-211ENST00000472637 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
NEPRO-211ENST00000472637 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
NEPRO-211ENST00000472637 CUL7Q14999 1698 aa21.85■■□□□ 1.09
NEPRO-211ENST00000472637 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
NEPRO-211ENST00000472637 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
NEPRO-211ENST00000472637 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
NEPRO-211ENST00000472637 P3H3Q8IVL6 736 aa21.75■■□□□ 1.07
NEPRO-211ENST00000472637 CTTNBP2Q8WZ74 1663 aa21.74■■□□□ 1.07
NEPRO-211ENST00000472637 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms