RNA–Protein interactions for RNA: ENST00000472616.1

KDM7A-202, Transcript of lysine demethylase 7A, humanhuman

TSL 1 (best)

Gene KDM7A, Length 7,943 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM7A-202ENST00000472616 MYT1Q01538 1121 aa11.15□□□□□ -0.62
KDM7A-202ENST00000472616 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.64
KDM7A-202ENST00000472616 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
KDM7A-202ENST00000472616 CENPBP07199 599 aaPredicted RBP10.03□□□□□ -0.8
KDM7A-202ENST00000472616 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
KDM7A-202ENST00000472616 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
KDM7A-202ENST00000472616 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
KDM7A-202ENST00000472616 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
KDM7A-202ENST00000472616 HRCP23327 699 aa9.66□□□□□ -0.86
KDM7A-202ENST00000472616 MYT1LQ9UL68 1186 aa9.5□□□□□ -0.89
KDM7A-202ENST00000472616 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
KDM7A-202ENST00000472616 NEFLP07196 543 aa9.49□□□□□ -0.89
KDM7A-202ENST00000472616 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
KDM7A-202ENST00000472616 GLIPR1L2Q4G1C9 344 aa9.38□□□□□ -0.91
KDM7A-202ENST00000472616 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
KDM7A-202ENST00000472616 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
KDM7A-202ENST00000472616 SUPT5HO00267 1087 aaKnown RBP9.27□□□□□ -0.93
KDM7A-202ENST00000472616 ACIN1Q9UKV3 1341 aaKnown RBP9.2□□□□□ -0.94
KDM7A-202ENST00000472616 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
KDM7A-202ENST00000472616 GTF3C3Q9Y5Q9 886 aa9.15□□□□□ -0.94
KDM7A-202ENST00000472616 APLP2Q06481 763 aa9.13□□□□□ -0.95
KDM7A-202ENST00000472616 RANGAP1P46060 587 aaPredicted RBP9.12□□□□□ -0.95
KDM7A-202ENST00000472616 DIEXFQ68CQ4 756 aaKnown RBP9.06□□□□□ -0.96
KDM7A-202ENST00000472616 NISCHQ9Y2I1 1504 aa9.06□□□□□ -0.96
KDM7A-202ENST00000472616 ANP32EQ9BTT0 268 aa9.04□□□□□ -0.96
KDM7A-202ENST00000472616 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
KDM7A-202ENST00000472616 FAM9AQ8IZU1 332 aaPredicted RBP9.02□□□□□ -0.97
KDM7A-202ENST00000472616 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
KDM7A-202ENST00000472616 SLC24A1O60721 1099 aa8.98□□□□□ -0.97
KDM7A-202ENST00000472616 ZNF316A6NFI3 1004 aaPredicted RBP8.95□□□□□ -0.98
KDM7A-202ENST00000472616 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
KDM7A-202ENST00000472616 EIF5BO60841 1220 aaKnown RBP8.94□□□□□ -0.98
KDM7A-202ENST00000472616 SCAF1Q9H7N4 1312 aaKnown RBP8.93□□□□□ -0.98
KDM7A-202ENST00000472616 ERICH6BQ5W0A0 696 aa8.89□□□□□ -0.99
KDM7A-202ENST00000472616 ANP32AP39687 249 aaKnown RBP8.88□□□□□ -0.99
KDM7A-202ENST00000472616 NCLP19338 710 aaKnown RBP8.87□□□□□ -0.99
KDM7A-202ENST00000472616 DCAF8L2P0C7V8 631 aa8.86□□□□□ -0.99
KDM7A-202ENST00000472616 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
KDM7A-202ENST00000472616 DCAF1Q9Y4B6 1507 aa8.77□□□□□ -1.01
KDM7A-202ENST00000472616 NEUROD1Q13562 356 aa8.76□□□□□ -1.01
KDM7A-202ENST00000472616 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
KDM7A-202ENST00000472616 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
KDM7A-202ENST00000472616 ANP32BQ92688 251 aaKnown RBP8.74□□□□□ -1.01
KDM7A-202ENST00000472616 TRIM44Q96DX7 344 aaPredicted RBP8.74□□□□□ -1.01
KDM7A-202ENST00000472616 CHIC1Q5VXU3 224 aa8.7□□□□□ -1.02
KDM7A-202ENST00000472616 PRKCSHP14314 528 aaPredicted RBP8.69□□□□□ -1.02
KDM7A-202ENST00000472616 ZBTB47Q9UFB7 747 aaPredicted RBP8.68□□□□□ -1.02
KDM7A-202ENST00000472616 ZNF326Q5BKZ1 582 aaKnown RBP8.67□□□□□ -1.02
KDM7A-202ENST00000472616 PPM1GO15355 546 aaPredicted RBP8.66□□□□□ -1.02
KDM7A-202ENST00000472616 ANP32CO43423 234 aa8.63□□□□□ -1.03
KDM7A-202ENST00000472616 BCANQ96GW7 911 aa8.62□□□□□ -1.03
KDM7A-202ENST00000472616 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
KDM7A-202ENST00000472616 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
KDM7A-202ENST00000472616 EHMT2Q96KQ7 1210 aa8.61□□□□□ -1.03
KDM7A-202ENST00000472616 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
KDM7A-202ENST00000472616 FKBP8Q14318 412 aa8.58□□□□□ -1.04
KDM7A-202ENST00000472616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.57□□□□□ -1.04
KDM7A-202ENST00000472616 NEFMP07197 916 aa8.57□□□□□ -1.04
KDM7A-202ENST00000472616 DEKP35659 375 aaKnown RBP8.56□□□□□ -1.04
KDM7A-202ENST00000472616 CCDC180Q9P1Z9 1646 aa8.53□□□□□ -1.04
KDM7A-202ENST00000472616 ARID4BQ4LE39 1312 aaPredicted RBP8.53□□□□□ -1.04
KDM7A-202ENST00000472616 POLR3GLQ9BT43 218 aa8.53□□□□□ -1.04
KDM7A-202ENST00000472616 PTMSP20962 102 aa8.52□□□□□ -1.05
KDM7A-202ENST00000472616 CSRNP3Q8WYN3 585 aa8.52□□□□□ -1.05
KDM7A-202ENST00000472616 NBR1Q14596 966 aa8.52□□□□□ -1.05
KDM7A-202ENST00000472616 NOP58Q9Y2X3 529 aaKnown RBP8.51□□□□□ -1.05
KDM7A-202ENST00000472616 HSP90AA1P07900 732 aaKnown RBP8.51□□□□□ -1.05
KDM7A-202ENST00000472616 UBTFP17480 764 aaKnown RBP8.51□□□□□ -1.05
KDM7A-202ENST00000472616 L1TD1Q5T7N2 865 aaKnown RBP8.5□□□□□ -1.05
KDM7A-202ENST00000472616 PKNOX2Q96KN3 472 aa8.5□□□□□ -1.05
KDM7A-202ENST00000472616 UPF2Q9HAU5 1272 aaKnown RBP8.49□□□□□ -1.05
KDM7A-202ENST00000472616 PODXL2Q9NZ53 605 aa8.48□□□□□ -1.05
KDM7A-202ENST00000472616 NAP1L5Q96NT1 182 aaPredicted RBP8.48□□□□□ -1.05
KDM7A-202ENST00000472616 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
KDM7A-202ENST00000472616 SUPT16HQ9Y5B9 1047 aaKnown RBP8.44□□□□□ -1.06
KDM7A-202ENST00000472616 BECN1Q14457 450 aa8.44□□□□□ -1.06
KDM7A-202ENST00000472616 LOC105371045A0A1W2PR82 267 aa8.43□□□□□ -1.06
KDM7A-202ENST00000472616 CNGB1Q14028 1251 aaPredicted RBP8.42□□□□□ -1.06
KDM7A-202ENST00000472616 HSP90AA2PQ14568 343 aaPredicted RBP8.41□□□□□ -1.06
KDM7A-202ENST00000472616 UBE2Q2Q8WVN8 375 aa8.4□□□□□ -1.06
KDM7A-202ENST00000472616 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
KDM7A-202ENST00000472616 CCDC136Q96JN2 1154 aa8.4□□□□□ -1.06
KDM7A-202ENST00000472616 NPM2Q86SE8 214 aaKnown RBP8.4□□□□□ -1.07
KDM7A-202ENST00000472616 PNNQ9H307 717 aaKnown RBP8.4□□□□□ -1.07
KDM7A-202ENST00000472616 HNRNPUL2Q1KMD3 747 aaKnown RBP8.39□□□□□ -1.07
KDM7A-202ENST00000472616 LAS1LQ9Y4W2 734 aaKnown RBP8.39□□□□□ -1.07
KDM7A-202ENST00000472616 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
KDM7A-202ENST00000472616 FANCIQ9NVI1 1328 aa8.38□□□□□ -1.07
KDM7A-202ENST00000472616 TSHZ2Q9NRE2 1034 aa8.38□□□□□ -1.07
KDM7A-202ENST00000472616 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
KDM7A-202ENST00000472616 GOLGA6L22H0YM25 854 aa8.37□□□□□ -1.07
KDM7A-202ENST00000472616 MAP7D2Q96T17 732 aa8.35□□□□□ -1.07
KDM7A-202ENST00000472616 MIER1Q8N108 512 aa8.35□□□□□ -1.07
KDM7A-202ENST00000472616 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.08
KDM7A-202ENST00000472616 RTN4Q9NQC3 1192 aaKnown RBP8.33□□□□□ -1.08
KDM7A-202ENST00000472616 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.33□□□□□ -1.08
KDM7A-202ENST00000472616 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
KDM7A-202ENST00000472616 CALRP27797 417 aaKnown RBP8.3□□□□□ -1.08
KDM7A-202ENST00000472616 CHAF1AQ13111 956 aaPredicted RBP8.29□□□□□ -1.08
KDM7A-202ENST00000472616 MSNP26038 577 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms