RNA–Protein interactions for RNA: ENST00000471500.5

MFSD1-209, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 2

Gene MFSD1, Length 2,097 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-209ENST00000471500 NISCHQ9Y2I1 1504 aa36.07■■■■□ 3.37
MFSD1-209ENST00000471500 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
MFSD1-209ENST00000471500 ZCCHC6Q5VYS8 1495 aaKnown RBP30.47■■■□□ 2.47
MFSD1-209ENST00000471500 SHROOM4Q9ULL8 1493 aa30.14■■■□□ 2.41
MFSD1-209ENST00000471500 DCAF1Q9Y4B6 1507 aa29.77■■■□□ 2.36
MFSD1-209ENST00000471500 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.33
MFSD1-209ENST00000471500 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
MFSD1-209ENST00000471500 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
MFSD1-209ENST00000471500 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
MFSD1-209ENST00000471500 NACADO15069 1562 aa28.69■■■□□ 2.18
MFSD1-209ENST00000471500 ABCC9O60706 1549 aa28.69■■■□□ 2.18
MFSD1-209ENST00000471500 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
MFSD1-209ENST00000471500 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
MFSD1-209ENST00000471500 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
MFSD1-209ENST00000471500 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
MFSD1-209ENST00000471500 MROH2BQ7Z745 1585 aa27.95■■■□□ 2.06
MFSD1-209ENST00000471500 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
MFSD1-209ENST00000471500 WIZO95785 1651 aa27.76■■■□□ 2.04
MFSD1-209ENST00000471500 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
MFSD1-209ENST00000471500 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
MFSD1-209ENST00000471500 SMARCA4P51532 1647 aa27.55■■■□□ 2
MFSD1-209ENST00000471500 TRIM41Q8WV44 630 aa27.54■■■□□ 2
MFSD1-209ENST00000471500 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.98
MFSD1-209ENST00000471500 TOP2AP11388 1531 aaKnown RBP27.44■■□□□ 1.98
MFSD1-209ENST00000471500 EIF4G1Q04637 1599 aaKnown RBP27.35■■□□□ 1.97
MFSD1-209ENST00000471500 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
MFSD1-209ENST00000471500 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
MFSD1-209ENST00000471500 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
MFSD1-209ENST00000471500 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
MFSD1-209ENST00000471500 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
MFSD1-209ENST00000471500 FAM9AQ8IZU1 332 aaPredicted RBP27.13■■□□□ 1.93
MFSD1-209ENST00000471500 HRCP23327 699 aa27.05■■□□□ 1.92
MFSD1-209ENST00000471500 ABCC8Q09428 1581 aa26.95■■□□□ 1.9
MFSD1-209ENST00000471500 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
MFSD1-209ENST00000471500 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
MFSD1-209ENST00000471500 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
MFSD1-209ENST00000471500 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
MFSD1-209ENST00000471500 EEA1Q15075 1411 aa26.65■■□□□ 1.86
MFSD1-209ENST00000471500 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
MFSD1-209ENST00000471500 SOGA1O94964 1423 aa26.63■■□□□ 1.85
MFSD1-209ENST00000471500 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
MFSD1-209ENST00000471500 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
MFSD1-209ENST00000471500 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
MFSD1-209ENST00000471500 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
MFSD1-209ENST00000471500 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
MFSD1-209ENST00000471500 TNIKQ9UKE5 1360 aa26.45■■□□□ 1.82
MFSD1-209ENST00000471500 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
MFSD1-209ENST00000471500 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
MFSD1-209ENST00000471500 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
MFSD1-209ENST00000471500 TOP2BQ02880 1626 aa26.3■■□□□ 1.8
MFSD1-209ENST00000471500 KIF21BO75037 1637 aa26.28■■□□□ 1.8
MFSD1-209ENST00000471500 CEP164Q9UPV0 1460 aa26.26■■□□□ 1.79
MFSD1-209ENST00000471500 UBTFP17480 764 aaKnown RBP26.25■■□□□ 1.79
MFSD1-209ENST00000471500 BIVM-ERCC5R4GMW8 1640 aa26.24■■□□□ 1.79
MFSD1-209ENST00000471500 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
MFSD1-209ENST00000471500 CFTRP13569 1480 aa26.16■■□□□ 1.78
MFSD1-209ENST00000471500 CUX1P39880 1505 aa26.06■■□□□ 1.76
MFSD1-209ENST00000471500 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
MFSD1-209ENST00000471500 RAPGEF2Q9Y4G8 1499 aa26.03■■□□□ 1.76
MFSD1-209ENST00000471500 CLIP1P30622 1438 aa25.99■■□□□ 1.75
MFSD1-209ENST00000471500 CC2D2AQ9P2K1 1620 aa25.95■■□□□ 1.74
MFSD1-209ENST00000471500 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
MFSD1-209ENST00000471500 PRXQ9BXM0 1461 aa25.93■■□□□ 1.74
MFSD1-209ENST00000471500 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
MFSD1-209ENST00000471500 KIF27Q86VH2 1401 aa25.87■■□□□ 1.73
MFSD1-209ENST00000471500 VPS8Q8N3P4 1428 aa25.87■■□□□ 1.73
MFSD1-209ENST00000471500 TTBK1Q5TCY1 1321 aaPredicted RBP25.83■■□□□ 1.73
MFSD1-209ENST00000471500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.76■■□□□ 1.71
MFSD1-209ENST00000471500 CCER1Q8TC90 406 aaPredicted RBP25.72■■□□□ 1.71
MFSD1-209ENST00000471500 CUX2O14529 1486 aa25.64■■□□□ 1.7
MFSD1-209ENST00000471500 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.69
MFSD1-209ENST00000471500 APLP2Q06481 763 aa25.64■■□□□ 1.69
MFSD1-209ENST00000471500 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
MFSD1-209ENST00000471500 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
MFSD1-209ENST00000471500 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
MFSD1-209ENST00000471500 IGF1RP08069 1367 aa25.6■■□□□ 1.69
MFSD1-209ENST00000471500 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
MFSD1-209ENST00000471500 CARMIL1Q5VZK9 1371 aa25.47■■□□□ 1.67
MFSD1-209ENST00000471500 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
MFSD1-209ENST00000471500 NESP48681 1621 aa25.47■■□□□ 1.67
MFSD1-209ENST00000471500 TOPBP1Q92547 1522 aa25.45■■□□□ 1.66
MFSD1-209ENST00000471500 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
MFSD1-209ENST00000471500 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
MFSD1-209ENST00000471500 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
MFSD1-209ENST00000471500 HNRNPUL2Q1KMD3 747 aaKnown RBP25.39■■□□□ 1.65
MFSD1-209ENST00000471500 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
MFSD1-209ENST00000471500 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
MFSD1-209ENST00000471500 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
MFSD1-209ENST00000471500 CUL7Q14999 1698 aa25.25■■□□□ 1.63
MFSD1-209ENST00000471500 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
MFSD1-209ENST00000471500 RRBP1Q9P2E9 1410 aaKnown RBP25.24■■□□□ 1.63
MFSD1-209ENST00000471500 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
MFSD1-209ENST00000471500 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
MFSD1-209ENST00000471500 TIAM1Q13009 1591 aa25.16■■□□□ 1.62
MFSD1-209ENST00000471500 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
MFSD1-209ENST00000471500 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
MFSD1-209ENST00000471500 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
MFSD1-209ENST00000471500 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
MFSD1-209ENST00000471500 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
MFSD1-209ENST00000471500 CTTNBP2Q8WZ74 1663 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms