RNA–Protein interactions for RNA: ENST00000471449.1

RAF1-208, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-208ENST00000471449 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
RAF1-208ENST00000471449 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
RAF1-208ENST00000471449 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
RAF1-208ENST00000471449 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
RAF1-208ENST00000471449 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
RAF1-208ENST00000471449 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
RAF1-208ENST00000471449 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
RAF1-208ENST00000471449 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
RAF1-208ENST00000471449 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
RAF1-208ENST00000471449 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
RAF1-208ENST00000471449 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
RAF1-208ENST00000471449 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
RAF1-208ENST00000471449 ABCC9O60706 1549 aa15.27■□□□□ 0.03
RAF1-208ENST00000471449 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
RAF1-208ENST00000471449 NACADO15069 1562 aa15.18■□□□□ 0.02
RAF1-208ENST00000471449 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
RAF1-208ENST00000471449 KCNA4P22459 653 aa15.01□□□□□ -0.01
RAF1-208ENST00000471449 SCRIBQ14160 1630 aa15□□□□□ -0.01
RAF1-208ENST00000471449 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
RAF1-208ENST00000471449 ADRA2BP18089 450 aa14.94□□□□□ -0.02
RAF1-208ENST00000471449 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
RAF1-208ENST00000471449 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
RAF1-208ENST00000471449 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
RAF1-208ENST00000471449 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
RAF1-208ENST00000471449 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
RAF1-208ENST00000471449 BAZ1AQ9NRL2 1556 aaPredicted RBP14.55□□□□□ -0.08
RAF1-208ENST00000471449 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAF1-208ENST00000471449 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.08
RAF1-208ENST00000471449 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
RAF1-208ENST00000471449 FOXD1Q16676 465 aa14.46□□□□□ -0.09
RAF1-208ENST00000471449 WIZO95785 1651 aa14.43□□□□□ -0.1
RAF1-208ENST00000471449 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
RAF1-208ENST00000471449 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
RAF1-208ENST00000471449 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
RAF1-208ENST00000471449 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
RAF1-208ENST00000471449 TRIM41Q8WV44 630 aa14.27□□□□□ -0.13
RAF1-208ENST00000471449 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
RAF1-208ENST00000471449 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
RAF1-208ENST00000471449 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
RAF1-208ENST00000471449 SMARCA2P51531 1590 aa14.2□□□□□ -0.14
RAF1-208ENST00000471449 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
RAF1-208ENST00000471449 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
RAF1-208ENST00000471449 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
RAF1-208ENST00000471449 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
RAF1-208ENST00000471449 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
RAF1-208ENST00000471449 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
RAF1-208ENST00000471449 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
RAF1-208ENST00000471449 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
RAF1-208ENST00000471449 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
RAF1-208ENST00000471449 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
RAF1-208ENST00000471449 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
RAF1-208ENST00000471449 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
RAF1-208ENST00000471449 ZBTB22O15209 634 aa13.86□□□□□ -0.19
RAF1-208ENST00000471449 EEA1Q15075 1411 aa13.85□□□□□ -0.19
RAF1-208ENST00000471449 SOGA1O94964 1423 aa13.82□□□□□ -0.2
RAF1-208ENST00000471449 CFTRP13569 1480 aa13.81□□□□□ -0.2
RAF1-208ENST00000471449 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
RAF1-208ENST00000471449 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
RAF1-208ENST00000471449 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
RAF1-208ENST00000471449 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
RAF1-208ENST00000471449 MSH5O43196 834 aa13.75□□□□□ -0.21
RAF1-208ENST00000471449 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
RAF1-208ENST00000471449 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
RAF1-208ENST00000471449 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
RAF1-208ENST00000471449 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
RAF1-208ENST00000471449 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
RAF1-208ENST00000471449 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
RAF1-208ENST00000471449 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
RAF1-208ENST00000471449 CUX1P39880 1505 aa13.64□□□□□ -0.23
RAF1-208ENST00000471449 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
RAF1-208ENST00000471449 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
RAF1-208ENST00000471449 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
RAF1-208ENST00000471449 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
RAF1-208ENST00000471449 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
RAF1-208ENST00000471449 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
RAF1-208ENST00000471449 KIF21BO75037 1637 aa13.56□□□□□ -0.24
RAF1-208ENST00000471449 HRCP23327 699 aa13.55□□□□□ -0.24
RAF1-208ENST00000471449 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
RAF1-208ENST00000471449 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
RAF1-208ENST00000471449 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
RAF1-208ENST00000471449 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
RAF1-208ENST00000471449 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
RAF1-208ENST00000471449 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
RAF1-208ENST00000471449 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
RAF1-208ENST00000471449 NESP48681 1621 aa13.48□□□□□ -0.25
RAF1-208ENST00000471449 IGF1RP08069 1367 aa13.46□□□□□ -0.25
RAF1-208ENST00000471449 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
RAF1-208ENST00000471449 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
RAF1-208ENST00000471449 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
RAF1-208ENST00000471449 CLIP1P30622 1438 aa13.45□□□□□ -0.26
RAF1-208ENST00000471449 CUX2O14529 1486 aa13.43□□□□□ -0.26
RAF1-208ENST00000471449 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
RAF1-208ENST00000471449 PPARGC1BQ86YN6 1023 aaKnown RBP13.42□□□□□ -0.26
RAF1-208ENST00000471449 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
RAF1-208ENST00000471449 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
RAF1-208ENST00000471449 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
RAF1-208ENST00000471449 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
RAF1-208ENST00000471449 ABCA10Q8WWZ4 1543 aa13.36□□□□□ -0.27
RAF1-208ENST00000471449 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
RAF1-208ENST00000471449 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms