RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 NISCHQ9Y2I1 1504 aa32.76■■■□□ 2.84
HOXB3-205ENST00000470495 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
HOXB3-205ENST00000470495 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
HOXB3-205ENST00000470495 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.16
HOXB3-205ENST00000470495 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
HOXB3-205ENST00000470495 MYT1Q01538 1121 aa27.52■■■□□ 2
HOXB3-205ENST00000470495 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
HOXB3-205ENST00000470495 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
HOXB3-205ENST00000470495 ABCC9O60706 1549 aa27.04■■□□□ 1.92
HOXB3-205ENST00000470495 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
HOXB3-205ENST00000470495 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
HOXB3-205ENST00000470495 FAM9AQ8IZU1 332 aaPredicted RBP26.63■■□□□ 1.85
HOXB3-205ENST00000470495 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
HOXB3-205ENST00000470495 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
HOXB3-205ENST00000470495 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
HOXB3-205ENST00000470495 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
HOXB3-205ENST00000470495 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
HOXB3-205ENST00000470495 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.79
HOXB3-205ENST00000470495 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
HOXB3-205ENST00000470495 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
HOXB3-205ENST00000470495 NACADO15069 1562 aa25.96■■□□□ 1.75
HOXB3-205ENST00000470495 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
HOXB3-205ENST00000470495 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
HOXB3-205ENST00000470495 TTBK1Q5TCY1 1321 aaPredicted RBP25.77■■□□□ 1.72
HOXB3-205ENST00000470495 PPARGC1BQ86YN6 1023 aaKnown RBP25.71■■□□□ 1.71
HOXB3-205ENST00000470495 ERICH6Q7L0X2 663 aa25.66■■□□□ 1.7
HOXB3-205ENST00000470495 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.69
HOXB3-205ENST00000470495 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
HOXB3-205ENST00000470495 TRIM26Q12899 539 aaPredicted RBP25.54■■□□□ 1.68
HOXB3-205ENST00000470495 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
HOXB3-205ENST00000470495 HRCP23327 699 aa25.51■■□□□ 1.67
HOXB3-205ENST00000470495 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
HOXB3-205ENST00000470495 APLP2Q06481 763 aa25.27■■□□□ 1.64
HOXB3-205ENST00000470495 WIZO95785 1651 aa25.27■■□□□ 1.64
HOXB3-205ENST00000470495 CCER1Q8TC90 406 aaPredicted RBP25.09■■□□□ 1.61
HOXB3-205ENST00000470495 CENPBP07199 599 aaPredicted RBP25.06■■□□□ 1.6
HOXB3-205ENST00000470495 CSRNP3Q8WYN3 585 aa25.06■■□□□ 1.6
HOXB3-205ENST00000470495 PRKCSHP14314 528 aaPredicted RBP25.04■■□□□ 1.6
HOXB3-205ENST00000470495 ZEB1P37275 1124 aaPredicted RBP25.03■■□□□ 1.6
HOXB3-205ENST00000470495 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
HOXB3-205ENST00000470495 BCL11AQ9H165 835 aa24.96■■□□□ 1.59
HOXB3-205ENST00000470495 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
HOXB3-205ENST00000470495 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
HOXB3-205ENST00000470495 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
HOXB3-205ENST00000470495 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
HOXB3-205ENST00000470495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
HOXB3-205ENST00000470495 ATP1B4Q9UN42 357 aaPredicted RBP24.8■■□□□ 1.56
HOXB3-205ENST00000470495 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
HOXB3-205ENST00000470495 SLC24A1O60721 1099 aa24.75■■□□□ 1.55
HOXB3-205ENST00000470495 SOGA1O94964 1423 aa24.75■■□□□ 1.55
HOXB3-205ENST00000470495 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
HOXB3-205ENST00000470495 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
HOXB3-205ENST00000470495 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
HOXB3-205ENST00000470495 CEP162Q5TB80 1403 aa24.58■■□□□ 1.53
HOXB3-205ENST00000470495 EEA1Q15075 1411 aa24.52■■□□□ 1.52
HOXB3-205ENST00000470495 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
HOXB3-205ENST00000470495 ITGAEP38570 1179 aa24.52■■□□□ 1.52
HOXB3-205ENST00000470495 SCAF1Q9H7N4 1312 aaKnown RBP24.51■■□□□ 1.51
HOXB3-205ENST00000470495 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
HOXB3-205ENST00000470495 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
HOXB3-205ENST00000470495 TNIKQ9UKE5 1360 aa24.46■■□□□ 1.51
HOXB3-205ENST00000470495 GOLGA3Q08378 1498 aa24.46■■□□□ 1.51
HOXB3-205ENST00000470495 CLIP1P30622 1438 aa24.39■■□□□ 1.49
HOXB3-205ENST00000470495 P3H3Q8IVL6 736 aa24.34■■□□□ 1.49
HOXB3-205ENST00000470495 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.48
HOXB3-205ENST00000470495 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
HOXB3-205ENST00000470495 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
HOXB3-205ENST00000470495 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
HOXB3-205ENST00000470495 EIF5BO60841 1220 aaKnown RBP24.14■■□□□ 1.46
HOXB3-205ENST00000470495 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.45
HOXB3-205ENST00000470495 FAM50AQ14320 339 aaKnown RBP24.11■■□□□ 1.45
HOXB3-205ENST00000470495 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
HOXB3-205ENST00000470495 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
HOXB3-205ENST00000470495 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
HOXB3-205ENST00000470495 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
HOXB3-205ENST00000470495 CUX2O14529 1486 aa24.03■■□□□ 1.44
HOXB3-205ENST00000470495 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
HOXB3-205ENST00000470495 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
HOXB3-205ENST00000470495 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
HOXB3-205ENST00000470495 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
HOXB3-205ENST00000470495 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.42
HOXB3-205ENST00000470495 ACIN1Q9UKV3 1341 aaKnown RBP23.86■■□□□ 1.41
HOXB3-205ENST00000470495 KANK4Q5T7N3 995 aaPredicted RBP23.86■■□□□ 1.41
HOXB3-205ENST00000470495 FBLN2P98095 1184 aa23.84■■□□□ 1.41
HOXB3-205ENST00000470495 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
HOXB3-205ENST00000470495 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
HOXB3-205ENST00000470495 CFTRP13569 1480 aa23.82■■□□□ 1.4
HOXB3-205ENST00000470495 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
HOXB3-205ENST00000470495 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
HOXB3-205ENST00000470495 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
HOXB3-205ENST00000470495 CUX1P39880 1505 aa23.74■■□□□ 1.39
HOXB3-205ENST00000470495 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
HOXB3-205ENST00000470495 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
HOXB3-205ENST00000470495 ANP32EQ9BTT0 268 aa23.7■■□□□ 1.38
HOXB3-205ENST00000470495 KIF21BO75037 1637 aa23.69■■□□□ 1.38
HOXB3-205ENST00000470495 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
HOXB3-205ENST00000470495 IGF1RP08069 1367 aa23.68■■□□□ 1.38
HOXB3-205ENST00000470495 NESP48681 1621 aa23.64■■□□□ 1.37
HOXB3-205ENST00000470495 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
HOXB3-205ENST00000470495 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms