RNA–Protein interactions for RNA: ENST00000470314.5

NINJ1-203, Transcript of ninjurin 1, humanhuman

TSL 3

Gene NINJ1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-203ENST00000470314 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
NINJ1-203ENST00000470314 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
NINJ1-203ENST00000470314 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
NINJ1-203ENST00000470314 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
NINJ1-203ENST00000470314 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
NINJ1-203ENST00000470314 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
NINJ1-203ENST00000470314 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
NINJ1-203ENST00000470314 NACADO15069 1562 aa24.21■■□□□ 1.47
NINJ1-203ENST00000470314 ABCC9O60706 1549 aa24.2■■□□□ 1.46
NINJ1-203ENST00000470314 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
NINJ1-203ENST00000470314 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
NINJ1-203ENST00000470314 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
NINJ1-203ENST00000470314 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
NINJ1-203ENST00000470314 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
NINJ1-203ENST00000470314 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
NINJ1-203ENST00000470314 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
NINJ1-203ENST00000470314 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
NINJ1-203ENST00000470314 BAZ1AQ9NRL2 1556 aaPredicted RBP23.16■■□□□ 1.3
NINJ1-203ENST00000470314 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
NINJ1-203ENST00000470314 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
NINJ1-203ENST00000470314 WIZO95785 1651 aa22.95■■□□□ 1.26
NINJ1-203ENST00000470314 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
NINJ1-203ENST00000470314 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
NINJ1-203ENST00000470314 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
NINJ1-203ENST00000470314 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
NINJ1-203ENST00000470314 TRIM41Q8WV44 630 aa22.58■■□□□ 1.21
NINJ1-203ENST00000470314 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
NINJ1-203ENST00000470314 SMARCA2P51531 1590 aa22.57■■□□□ 1.2
NINJ1-203ENST00000470314 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
NINJ1-203ENST00000470314 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
NINJ1-203ENST00000470314 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
NINJ1-203ENST00000470314 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
NINJ1-203ENST00000470314 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
NINJ1-203ENST00000470314 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
NINJ1-203ENST00000470314 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
NINJ1-203ENST00000470314 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
NINJ1-203ENST00000470314 EEA1Q15075 1411 aa22.02■■□□□ 1.12
NINJ1-203ENST00000470314 CFTRP13569 1480 aa21.95■■□□□ 1.1
NINJ1-203ENST00000470314 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
NINJ1-203ENST00000470314 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
NINJ1-203ENST00000470314 SOGA1O94964 1423 aa21.86■■□□□ 1.09
NINJ1-203ENST00000470314 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
NINJ1-203ENST00000470314 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
NINJ1-203ENST00000470314 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
NINJ1-203ENST00000470314 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
NINJ1-203ENST00000470314 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
NINJ1-203ENST00000470314 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
NINJ1-203ENST00000470314 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
NINJ1-203ENST00000470314 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
NINJ1-203ENST00000470314 CUX1P39880 1505 aa21.64■■□□□ 1.05
NINJ1-203ENST00000470314 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
NINJ1-203ENST00000470314 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
NINJ1-203ENST00000470314 PCGF6Q9BYE7 350 aa21.61■■□□□ 1.05
NINJ1-203ENST00000470314 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
NINJ1-203ENST00000470314 KIF21BO75037 1637 aa21.59■■□□□ 1.05
NINJ1-203ENST00000470314 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
NINJ1-203ENST00000470314 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
NINJ1-203ENST00000470314 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
NINJ1-203ENST00000470314 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
NINJ1-203ENST00000470314 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
NINJ1-203ENST00000470314 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
NINJ1-203ENST00000470314 PRXQ9BXM0 1461 aa21.45■■□□□ 1.02
NINJ1-203ENST00000470314 ERICH3Q5RHP9 1530 aa21.43■■□□□ 1.02
NINJ1-203ENST00000470314 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
NINJ1-203ENST00000470314 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
NINJ1-203ENST00000470314 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
NINJ1-203ENST00000470314 HRCP23327 699 aa21.35■■□□□ 1.01
NINJ1-203ENST00000470314 NESP48681 1621 aa21.35■■□□□ 1.01
NINJ1-203ENST00000470314 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
NINJ1-203ENST00000470314 IGF1RP08069 1367 aa21.32■■□□□ 1
NINJ1-203ENST00000470314 TOPBP1Q92547 1522 aa21.29■■□□□ 1
NINJ1-203ENST00000470314 CLIP1P30622 1438 aa21.29■■□□□ 1
NINJ1-203ENST00000470314 CUX2O14529 1486 aa21.28■■□□□ 1
NINJ1-203ENST00000470314 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
NINJ1-203ENST00000470314 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
NINJ1-203ENST00000470314 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
NINJ1-203ENST00000470314 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
NINJ1-203ENST00000470314 VPS8Q8N3P4 1428 aa21.17■□□□□ 0.98
NINJ1-203ENST00000470314 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
NINJ1-203ENST00000470314 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
NINJ1-203ENST00000470314 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
NINJ1-203ENST00000470314 APLP2Q06481 763 aa21.04■□□□□ 0.96
NINJ1-203ENST00000470314 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
NINJ1-203ENST00000470314 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
NINJ1-203ENST00000470314 CUL7Q14999 1698 aa21■□□□□ 0.95
NINJ1-203ENST00000470314 MRC2Q9UBG0 1479 aa21■□□□□ 0.95
NINJ1-203ENST00000470314 ARAP1Q96P48 1450 aa20.99■□□□□ 0.95
NINJ1-203ENST00000470314 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
NINJ1-203ENST00000470314 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
NINJ1-203ENST00000470314 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
NINJ1-203ENST00000470314 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
NINJ1-203ENST00000470314 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
NINJ1-203ENST00000470314 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
NINJ1-203ENST00000470314 WDR62O43379 1518 aa20.86■□□□□ 0.93
NINJ1-203ENST00000470314 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
NINJ1-203ENST00000470314 MAP3K1Q13233 1512 aa20.84■□□□□ 0.93
NINJ1-203ENST00000470314 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
NINJ1-203ENST00000470314 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
NINJ1-203ENST00000470314 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
NINJ1-203ENST00000470314 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms