RNA–Protein interactions for RNA: ENST00000470131.5

PDCD10-206, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDCD10, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-206ENST00000470131 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
PDCD10-206ENST00000470131 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
PDCD10-206ENST00000470131 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
PDCD10-206ENST00000470131 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
PDCD10-206ENST00000470131 FOXD1Q16676 465 aa20.26■□□□□ 0.83
PDCD10-206ENST00000470131 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
PDCD10-206ENST00000470131 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
PDCD10-206ENST00000470131 ADRA2BP18089 450 aa19.19■□□□□ 0.66
PDCD10-206ENST00000470131 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
PDCD10-206ENST00000470131 MSH5O43196 834 aa18.81■□□□□ 0.6
PDCD10-206ENST00000470131 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
PDCD10-206ENST00000470131 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
PDCD10-206ENST00000470131 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
PDCD10-206ENST00000470131 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
PDCD10-206ENST00000470131 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
PDCD10-206ENST00000470131 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
PDCD10-206ENST00000470131 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
PDCD10-206ENST00000470131 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
PDCD10-206ENST00000470131 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
PDCD10-206ENST00000470131 KCNA4P22459 653 aa16.76■□□□□ 0.27
PDCD10-206ENST00000470131 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
PDCD10-206ENST00000470131 DCAF8L1A6NGE4 600 aa16.55■□□□□ 0.24
PDCD10-206ENST00000470131 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
PDCD10-206ENST00000470131 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
PDCD10-206ENST00000470131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDCD10-206ENST00000470131 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
PDCD10-206ENST00000470131 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
PDCD10-206ENST00000470131 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
PDCD10-206ENST00000470131 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
PDCD10-206ENST00000470131 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
PDCD10-206ENST00000470131 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
PDCD10-206ENST00000470131 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
PDCD10-206ENST00000470131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
PDCD10-206ENST00000470131 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
PDCD10-206ENST00000470131 ZBTB22O15209 634 aa15.43■□□□□ 0.06
PDCD10-206ENST00000470131 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
PDCD10-206ENST00000470131 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
PDCD10-206ENST00000470131 APLP2Q06481 763 aa15.38■□□□□ 0.05
PDCD10-206ENST00000470131 CAPN15O75808 1086 aa15.35■□□□□ 0.05
PDCD10-206ENST00000470131 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
PDCD10-206ENST00000470131 DSG3P32926 999 aa15.2■□□□□ 0.02
PDCD10-206ENST00000470131 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
PDCD10-206ENST00000470131 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
PDCD10-206ENST00000470131 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
PDCD10-206ENST00000470131 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
PDCD10-206ENST00000470131 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
PDCD10-206ENST00000470131 ABCB7O75027 752 aa15.03■□□□□ -0
PDCD10-206ENST00000470131 POLA2Q14181 598 aa14.89□□□□□ -0.03
PDCD10-206ENST00000470131 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
PDCD10-206ENST00000470131 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
PDCD10-206ENST00000470131 FBLN2P98095 1184 aa14.45□□□□□ -0.1
PDCD10-206ENST00000470131 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
PDCD10-206ENST00000470131 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
PDCD10-206ENST00000470131 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
PDCD10-206ENST00000470131 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
PDCD10-206ENST00000470131 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
PDCD10-206ENST00000470131 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
PDCD10-206ENST00000470131 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
PDCD10-206ENST00000470131 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
PDCD10-206ENST00000470131 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
PDCD10-206ENST00000470131 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
PDCD10-206ENST00000470131 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
PDCD10-206ENST00000470131 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
PDCD10-206ENST00000470131 POTEHQ6S545 545 aa13.92□□□□□ -0.18
PDCD10-206ENST00000470131 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDCD10-206ENST00000470131 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
PDCD10-206ENST00000470131 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
PDCD10-206ENST00000470131 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDCD10-206ENST00000470131 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
PDCD10-206ENST00000470131 PROM2Q8N271 834 aa13.7□□□□□ -0.22
PDCD10-206ENST00000470131 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
PDCD10-206ENST00000470131 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
PDCD10-206ENST00000470131 FKBP8Q14318 412 aa13.63□□□□□ -0.23
PDCD10-206ENST00000470131 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
PDCD10-206ENST00000470131 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
PDCD10-206ENST00000470131 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
PDCD10-206ENST00000470131 HAX1O00165 279 aa13.37□□□□□ -0.27
PDCD10-206ENST00000470131 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
PDCD10-206ENST00000470131 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
PDCD10-206ENST00000470131 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
PDCD10-206ENST00000470131 EVX2Q03828 476 aa13.26□□□□□ -0.29
PDCD10-206ENST00000470131 SP7Q8TDD2 431 aaPredicted RBP13.25□□□□□ -0.29
PDCD10-206ENST00000470131 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
PDCD10-206ENST00000470131 MIER1Q8N108 512 aa13.2□□□□□ -0.3
PDCD10-206ENST00000470131 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
PDCD10-206ENST00000470131 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDCD10-206ENST00000470131 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
PDCD10-206ENST00000470131 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
PDCD10-206ENST00000470131 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
PDCD10-206ENST00000470131 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
PDCD10-206ENST00000470131 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
PDCD10-206ENST00000470131 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
PDCD10-206ENST00000470131 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
PDCD10-206ENST00000470131 GABBR2O75899 941 aa12.99□□□□□ -0.33
PDCD10-206ENST00000470131 CLCN6P51797 869 aa12.97□□□□□ -0.33
PDCD10-206ENST00000470131 NUBP1P53384 320 aa12.95□□□□□ -0.34
PDCD10-206ENST00000470131 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
PDCD10-206ENST00000470131 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
PDCD10-206ENST00000470131 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
PDCD10-206ENST00000470131 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms