RNA–Protein interactions for RNA: ENST00000467849.1

CCNL1-210, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-210ENST00000467849 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
CCNL1-210ENST00000467849 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
CCNL1-210ENST00000467849 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
CCNL1-210ENST00000467849 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
CCNL1-210ENST00000467849 FOXD1Q16676 465 aa21.86■■□□□ 1.09
CCNL1-210ENST00000467849 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
CCNL1-210ENST00000467849 MSH5O43196 834 aa20.54■□□□□ 0.88
CCNL1-210ENST00000467849 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
CCNL1-210ENST00000467849 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
CCNL1-210ENST00000467849 ADRA2BP18089 450 aa20.48■□□□□ 0.87
CCNL1-210ENST00000467849 POTEDQ86YR6 584 aa19.58■□□□□ 0.72
CCNL1-210ENST00000467849 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
CCNL1-210ENST00000467849 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
CCNL1-210ENST00000467849 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
CCNL1-210ENST00000467849 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
CCNL1-210ENST00000467849 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
CCNL1-210ENST00000467849 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
CCNL1-210ENST00000467849 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
CCNL1-210ENST00000467849 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
CCNL1-210ENST00000467849 DCAF8L1A6NGE4 600 aa17.89■□□□□ 0.45
CCNL1-210ENST00000467849 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
CCNL1-210ENST00000467849 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
CCNL1-210ENST00000467849 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
CCNL1-210ENST00000467849 KCNA4P22459 653 aa17.44■□□□□ 0.38
CCNL1-210ENST00000467849 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
CCNL1-210ENST00000467849 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
CCNL1-210ENST00000467849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■□□ 15
CCNL1-210ENST00000467849 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
CCNL1-210ENST00000467849 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
CCNL1-210ENST00000467849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
CCNL1-210ENST00000467849 APLP2Q06481 763 aa16.63■□□□□ 0.25
CCNL1-210ENST00000467849 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
CCNL1-210ENST00000467849 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
CCNL1-210ENST00000467849 CAPN15O75808 1086 aa16.55■□□□□ 0.24
CCNL1-210ENST00000467849 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
CCNL1-210ENST00000467849 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
CCNL1-210ENST00000467849 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
CCNL1-210ENST00000467849 DSG3P32926 999 aa16.4■□□□□ 0.22
CCNL1-210ENST00000467849 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
CCNL1-210ENST00000467849 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
CCNL1-210ENST00000467849 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-210ENST00000467849 ABCB7O75027 752 aa16.11■□□□□ 0.17
CCNL1-210ENST00000467849 ZBTB22O15209 634 aa15.99■□□□□ 0.15
CCNL1-210ENST00000467849 POLA2Q14181 598 aa15.92■□□□□ 0.14
CCNL1-210ENST00000467849 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
CCNL1-210ENST00000467849 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
CCNL1-210ENST00000467849 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
CCNL1-210ENST00000467849 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
CCNL1-210ENST00000467849 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
CCNL1-210ENST00000467849 POTEHQ6S545 545 aa15.42■□□□□ 0.06
CCNL1-210ENST00000467849 FBLN2P98095 1184 aa15.41■□□□□ 0.06
CCNL1-210ENST00000467849 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
CCNL1-210ENST00000467849 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
CCNL1-210ENST00000467849 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
CCNL1-210ENST00000467849 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
CCNL1-210ENST00000467849 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
CCNL1-210ENST00000467849 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
CCNL1-210ENST00000467849 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
CCNL1-210ENST00000467849 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
CCNL1-210ENST00000467849 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
CCNL1-210ENST00000467849 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
CCNL1-210ENST00000467849 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
CCNL1-210ENST00000467849 PITPNM1O00562 1244 aa15□□□□□ -0.01
CCNL1-210ENST00000467849 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
CCNL1-210ENST00000467849 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
CCNL1-210ENST00000467849 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCNL1-210ENST00000467849 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
CCNL1-210ENST00000467849 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCNL1-210ENST00000467849 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
CCNL1-210ENST00000467849 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
CCNL1-210ENST00000467849 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
CCNL1-210ENST00000467849 HAX1O00165 279 aa14.59□□□□□ -0.07
CCNL1-210ENST00000467849 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
CCNL1-210ENST00000467849 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
CCNL1-210ENST00000467849 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
CCNL1-210ENST00000467849 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
CCNL1-210ENST00000467849 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
CCNL1-210ENST00000467849 PROM2Q8N271 834 aa14.31□□□□□ -0.12
CCNL1-210ENST00000467849 EVX2Q03828 476 aa14.3□□□□□ -0.12
CCNL1-210ENST00000467849 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
CCNL1-210ENST00000467849 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
CCNL1-210ENST00000467849 CLCN6P51797 869 aa14.16□□□□□ -0.14
CCNL1-210ENST00000467849 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCNL1-210ENST00000467849 GABBR2O75899 941 aa14.1□□□□□ -0.15
CCNL1-210ENST00000467849 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
CCNL1-210ENST00000467849 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CCNL1-210ENST00000467849 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
CCNL1-210ENST00000467849 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
CCNL1-210ENST00000467849 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
CCNL1-210ENST00000467849 ZRANB1Q9UGI0 708 aa14.01□□□□□ -0.17
CCNL1-210ENST00000467849 MIER1Q8N108 512 aa13.93□□□□□ -0.18
CCNL1-210ENST00000467849 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
CCNL1-210ENST00000467849 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
CCNL1-210ENST00000467849 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
CCNL1-210ENST00000467849 DCBLD2Q96PD2 775 aa13.82□□□□□ -0.2
CCNL1-210ENST00000467849 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
CCNL1-210ENST00000467849 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
CCNL1-210ENST00000467849 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
CCNL1-210ENST00000467849 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
CCNL1-210ENST00000467849 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms