RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
NELFA-213ENST00000467661 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
NELFA-213ENST00000467661 ZCCHC6Q5VYS8 1495 aaKnown RBP32.11■■■□□ 2.73
NELFA-213ENST00000467661 ABCC9O60706 1549 aa31.84■■■□□ 2.69
NELFA-213ENST00000467661 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
NELFA-213ENST00000467661 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.63
NELFA-213ENST00000467661 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
NELFA-213ENST00000467661 NACADO15069 1562 aa30.95■■■□□ 2.54
NELFA-213ENST00000467661 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
NELFA-213ENST00000467661 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
NELFA-213ENST00000467661 SUPT5HO00267 1087 aaKnown RBP30.76■■■□□ 2.51
NELFA-213ENST00000467661 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
NELFA-213ENST00000467661 UNC13AQ9UPW8 1703 aa30.32■■■□□ 2.44
NELFA-213ENST00000467661 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
NELFA-213ENST00000467661 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
NELFA-213ENST00000467661 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
NELFA-213ENST00000467661 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
NELFA-213ENST00000467661 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
NELFA-213ENST00000467661 MROH2BQ7Z745 1585 aa29.41■■■□□ 2.3
NELFA-213ENST00000467661 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
NELFA-213ENST00000467661 WIZO95785 1651 aa29.25■■■□□ 2.27
NELFA-213ENST00000467661 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
NELFA-213ENST00000467661 EIF4G1Q04637 1599 aaKnown RBP29.1■■■□□ 2.25
NELFA-213ENST00000467661 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
NELFA-213ENST00000467661 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
NELFA-213ENST00000467661 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
NELFA-213ENST00000467661 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
NELFA-213ENST00000467661 SMARCA2P51531 1590 aa28.7■■■□□ 2.19
NELFA-213ENST00000467661 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.18
NELFA-213ENST00000467661 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
NELFA-213ENST00000467661 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
NELFA-213ENST00000467661 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
NELFA-213ENST00000467661 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
NELFA-213ENST00000467661 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
NELFA-213ENST00000467661 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
NELFA-213ENST00000467661 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
NELFA-213ENST00000467661 ABCC8Q09428 1581 aa28.31■■■□□ 2.12
NELFA-213ENST00000467661 PCGF6Q9BYE7 350 aa28.22■■■□□ 2.11
NELFA-213ENST00000467661 EEA1Q15075 1411 aa28.06■■■□□ 2.08
NELFA-213ENST00000467661 TRIM26Q12899 539 aaPredicted RBP28.04■■■□□ 2.08
NELFA-213ENST00000467661 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
NELFA-213ENST00000467661 HRCP23327 699 aa28.02■■■□□ 2.08
NELFA-213ENST00000467661 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
NELFA-213ENST00000467661 SOGA1O94964 1423 aa27.91■■■□□ 2.06
NELFA-213ENST00000467661 SYNJ1O43426 1573 aa27.89■■■□□ 2.06
NELFA-213ENST00000467661 CSRNP3Q8WYN3 585 aa27.8■■■□□ 2.04
NELFA-213ENST00000467661 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
NELFA-213ENST00000467661 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
NELFA-213ENST00000467661 TNIKQ9UKE5 1360 aa27.74■■■□□ 2.03
NELFA-213ENST00000467661 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
NELFA-213ENST00000467661 NESP48681 1621 aa27.73■■■□□ 2.03
NELFA-213ENST00000467661 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
NELFA-213ENST00000467661 GOLGA3Q08378 1498 aa27.71■■■□□ 2.03
NELFA-213ENST00000467661 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
NELFA-213ENST00000467661 CFTRP13569 1480 aa27.68■■■□□ 2.02
NELFA-213ENST00000467661 KIF21BO75037 1637 aa27.66■■■□□ 2.02
NELFA-213ENST00000467661 CEP162Q5TB80 1403 aa27.66■■■□□ 2.02
NELFA-213ENST00000467661 CEP164Q9UPV0 1460 aa27.63■■■□□ 2.01
NELFA-213ENST00000467661 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
NELFA-213ENST00000467661 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
NELFA-213ENST00000467661 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
NELFA-213ENST00000467661 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
NELFA-213ENST00000467661 CUX1P39880 1505 aa27.46■■□□□ 1.99
NELFA-213ENST00000467661 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
NELFA-213ENST00000467661 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
NELFA-213ENST00000467661 ZEB1P37275 1124 aaPredicted RBP27.36■■□□□ 1.97
NELFA-213ENST00000467661 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
NELFA-213ENST00000467661 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
NELFA-213ENST00000467661 PPARGC1BQ86YN6 1023 aaKnown RBP27.3■■□□□ 1.96
NELFA-213ENST00000467661 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
NELFA-213ENST00000467661 CLIP1P30622 1438 aa27.27■■□□□ 1.96
NELFA-213ENST00000467661 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
NELFA-213ENST00000467661 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
NELFA-213ENST00000467661 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
NELFA-213ENST00000467661 VPS8Q8N3P4 1428 aa27.15■■□□□ 1.94
NELFA-213ENST00000467661 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
NELFA-213ENST00000467661 WDR62O43379 1518 aa27.1■■□□□ 1.93
NELFA-213ENST00000467661 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
NELFA-213ENST00000467661 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
NELFA-213ENST00000467661 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
NELFA-213ENST00000467661 CUX2O14529 1486 aa27.03■■□□□ 1.92
NELFA-213ENST00000467661 TTBK1Q5TCY1 1321 aaPredicted RBP26.97■■□□□ 1.91
NELFA-213ENST00000467661 APLP2Q06481 763 aa26.96■■□□□ 1.91
NELFA-213ENST00000467661 IGF1RP08069 1367 aa26.9■■□□□ 1.9
NELFA-213ENST00000467661 ARAP1Q96P48 1450 aa26.89■■□□□ 1.9
NELFA-213ENST00000467661 RANGAP1P46060 587 aaPredicted RBP26.86■■□□□ 1.89
NELFA-213ENST00000467661 POLA1P09884 1462 aaPredicted RBP26.85■■□□□ 1.89
NELFA-213ENST00000467661 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
NELFA-213ENST00000467661 CCER1Q8TC90 406 aaPredicted RBP26.83■■□□□ 1.89
NELFA-213ENST00000467661 CARMIL1Q5VZK9 1371 aa26.82■■□□□ 1.88
NELFA-213ENST00000467661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
NELFA-213ENST00000467661 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
NELFA-213ENST00000467661 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
NELFA-213ENST00000467661 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
NELFA-213ENST00000467661 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
NELFA-213ENST00000467661 CUL7Q14999 1698 aa26.72■■□□□ 1.87
NELFA-213ENST00000467661 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
NELFA-213ENST00000467661 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
NELFA-213ENST00000467661 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
NELFA-213ENST00000467661 CTTNBP2Q8WZ74 1663 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms