RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
TRA2B-209ENST00000466832 AEBP2Q6ZN18 517 aaPredicted RBP14.97□□□□□ -0.01
TRA2B-209ENST00000466832 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
TRA2B-209ENST00000466832 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
TRA2B-209ENST00000466832 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-209ENST00000466832 NISCHQ9Y2I1 1504 aa12.42□□□□□ -0.42
TRA2B-209ENST00000466832 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
TRA2B-209ENST00000466832 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
TRA2B-209ENST00000466832 ABCC9O60706 1549 aa12.25□□□□□ -0.45
TRA2B-209ENST00000466832 ADRA2BP18089 450 aa11.83□□□□□ -0.52
TRA2B-209ENST00000466832 KCNA4P22459 653 aa11.72□□□□□ -0.53
TRA2B-209ENST00000466832 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
TRA2B-209ENST00000466832 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
TRA2B-209ENST00000466832 FOXD1Q16676 465 aa11.62□□□□□ -0.55
TRA2B-209ENST00000466832 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
TRA2B-209ENST00000466832 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
TRA2B-209ENST00000466832 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
TRA2B-209ENST00000466832 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
TRA2B-209ENST00000466832 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
TRA2B-209ENST00000466832 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
TRA2B-209ENST00000466832 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
TRA2B-209ENST00000466832 CUX2O14529 1486 aa11.18□□□□□ -0.62
TRA2B-209ENST00000466832 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
TRA2B-209ENST00000466832 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRA2B-209ENST00000466832 PIAS4Q8N2W9 510 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-209ENST00000466832 CC2D2AQ9P2K1 1620 aa11.08□□□□□ -0.64
TRA2B-209ENST00000466832 NACADO15069 1562 aa11.03□□□□□ -0.64
TRA2B-209ENST00000466832 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
TRA2B-209ENST00000466832 NPM3O75607 178 aaKnown RBP10.99□□□□□ -0.65
TRA2B-209ENST00000466832 BICRAQ9NZM4 1560 aa10.97□□□□□ -0.65
TRA2B-209ENST00000466832 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
TRA2B-209ENST00000466832 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
TRA2B-209ENST00000466832 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
TRA2B-209ENST00000466832 ZBTB22O15209 634 aa10.8□□□□□ -0.68
TRA2B-209ENST00000466832 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
TRA2B-209ENST00000466832 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
TRA2B-209ENST00000466832 ILDR1Q86SU0 546 aaPredicted RBP10.65□□□□□ -0.7
TRA2B-209ENST00000466832 FOXD4L1Q9NU39 408 aa10.63□□□□□ -0.71
TRA2B-209ENST00000466832 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
TRA2B-209ENST00000466832 ZCCHC6Q5VYS8 1495 aaKnown RBP10.53□□□□□ -0.72
TRA2B-209ENST00000466832 MSH5O43196 834 aa10.49□□□□□ -0.73
TRA2B-209ENST00000466832 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
TRA2B-209ENST00000466832 SLC24A1O60721 1099 aa10.46□□□□□ -0.74
TRA2B-209ENST00000466832 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
TRA2B-209ENST00000466832 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
TRA2B-209ENST00000466832 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
TRA2B-209ENST00000466832 THOC2Q8NI27 1593 aaKnown RBP10.42□□□□□ -0.74
TRA2B-209ENST00000466832 MAPK8IP2Q13387 824 aaPredicted RBP10.41□□□□□ -0.74
TRA2B-209ENST00000466832 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
TRA2B-209ENST00000466832 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
TRA2B-209ENST00000466832 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
TRA2B-209ENST00000466832 RIMBP3CA6NJZ7 1639 aa10.37□□□□□ -0.75
TRA2B-209ENST00000466832 RIMBP3BA6NNM3 1639 aa10.37□□□□□ -0.75
TRA2B-209ENST00000466832 RIMBP3Q9UFD9 1639 aa10.37□□□□□ -0.75
TRA2B-209ENST00000466832 BAZ1AQ9NRL2 1556 aaPredicted RBP10.36□□□□□ -0.75
TRA2B-209ENST00000466832 SCRIBQ14160 1630 aa10.24□□□□□ -0.77
TRA2B-209ENST00000466832 HOXD11P31277 338 aaPredicted RBP10.24□□□□□ -0.77
TRA2B-209ENST00000466832 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
TRA2B-209ENST00000466832 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
TRA2B-209ENST00000466832 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
TRA2B-209ENST00000466832 NESP48681 1621 aa10.19□□□□□ -0.78
TRA2B-209ENST00000466832 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
TRA2B-209ENST00000466832 SMARCA2P51531 1590 aa10.16□□□□□ -0.78
TRA2B-209ENST00000466832 MYCNP04198 464 aaPredicted RBP10.16□□□□□ -0.78
TRA2B-209ENST00000466832 NCAPD3P42695 1498 aa10.16□□□□□ -0.78
TRA2B-209ENST00000466832 FKBP8Q14318 412 aa10.15□□□□□ -0.79
TRA2B-209ENST00000466832 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
TRA2B-209ENST00000466832 LAMC3Q9Y6N6 1575 aa10.13□□□□□ -0.79
TRA2B-209ENST00000466832 SOCS7O14512 581 aa10.1□□□□□ -0.79
TRA2B-209ENST00000466832 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
TRA2B-209ENST00000466832 KIF21AQ7Z4S6 1674 aa10.1□□□□□ -0.79
TRA2B-209ENST00000466832 PDS5BQ9NTI5 1447 aa10.09□□□□□ -0.79
TRA2B-209ENST00000466832 WDR62O43379 1518 aa10.06□□□□□ -0.8
TRA2B-209ENST00000466832 FBXO41Q8TF61 875 aa10.05□□□□□ -0.8
TRA2B-209ENST00000466832 MRC2Q9UBG0 1479 aa10.04□□□□□ -0.8
TRA2B-209ENST00000466832 ERCC6L2Q5T890 1561 aa10.03□□□□□ -0.8
TRA2B-209ENST00000466832 ARAP1Q96P48 1450 aa10.03□□□□□ -0.8
TRA2B-209ENST00000466832 HMGXB3Q12766 1538 aa10.01□□□□□ -0.81
TRA2B-209ENST00000466832 RSF1Q96T23 1441 aaPredicted RBP9.92□□□□□ -0.82
TRA2B-209ENST00000466832 ATAD2BQ9ULI0 1458 aa9.92□□□□□ -0.82
TRA2B-209ENST00000466832 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
TRA2B-209ENST00000466832 ILDR2Q71H61 639 aa9.83□□□□□ -0.84
TRA2B-209ENST00000466832 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
TRA2B-209ENST00000466832 HECW2Q9P2P5 1572 aa9.8□□□□□ -0.84
TRA2B-209ENST00000466832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.78□□□□□ -0.84
TRA2B-209ENST00000466832 HNRNPUL2Q1KMD3 747 aaKnown RBP9.78□□□□□ -0.84
TRA2B-209ENST00000466832 BAZ1BQ9UIG0 1483 aaKnown RBP9.78□□□□□ -0.84
TRA2B-209ENST00000466832 CEP164Q9UPV0 1460 aa9.78□□□□□ -0.84
TRA2B-209ENST00000466832 DISP3Q9P2K9 1392 aa9.77□□□□□ -0.85
TRA2B-209ENST00000466832 SAMD1Q6SPF0 538 aaPredicted RBP9.77□□□□□ -0.85
TRA2B-209ENST00000466832 CADPSQ9ULU8 1353 aa9.76□□□□□ -0.85
TRA2B-209ENST00000466832 SUPT5HO00267 1087 aaKnown RBP9.75□□□□□ -0.85
TRA2B-209ENST00000466832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.852e-9■■□□□ 11.4
TRA2B-209ENST00000466832 CHD1O14646 1710 aa9.7□□□□□ -0.86
TRA2B-209ENST00000466832 SYNJ2O15056 1496 aa9.67□□□□□ -0.86
TRA2B-209ENST00000466832 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
TRA2B-209ENST00000466832 SMARCA4P51532 1647 aa9.66□□□□□ -0.86
TRA2B-209ENST00000466832 U3KPZ7 1027 aaPredicted RBP9.66□□□□□ -0.86
TRA2B-209ENST00000466832 IFT140Q96RY7 1462 aa9.64□□□□□ -0.87
TRA2B-209ENST00000466832 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms