RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
CMC1-205ENST00000466830 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
CMC1-205ENST00000466830 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
CMC1-205ENST00000466830 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
CMC1-205ENST00000466830 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
CMC1-205ENST00000466830 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
CMC1-205ENST00000466830 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
CMC1-205ENST00000466830 APLP2Q06481 763 aa17.62■□□□□ 0.41
CMC1-205ENST00000466830 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
CMC1-205ENST00000466830 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
CMC1-205ENST00000466830 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.37
CMC1-205ENST00000466830 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
CMC1-205ENST00000466830 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
CMC1-205ENST00000466830 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
CMC1-205ENST00000466830 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
CMC1-205ENST00000466830 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
CMC1-205ENST00000466830 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
CMC1-205ENST00000466830 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.32
CMC1-205ENST00000466830 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.31
CMC1-205ENST00000466830 HRCP23327 699 aa16.97■□□□□ 0.31
CMC1-205ENST00000466830 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
CMC1-205ENST00000466830 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
CMC1-205ENST00000466830 ABCC9O60706 1549 aa16.75■□□□□ 0.27
CMC1-205ENST00000466830 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
CMC1-205ENST00000466830 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.25
CMC1-205ENST00000466830 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
CMC1-205ENST00000466830 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
CMC1-205ENST00000466830 ITGAEP38570 1179 aa16.55■□□□□ 0.24
CMC1-205ENST00000466830 NEFLP07196 543 aa16.51■□□□□ 0.23
CMC1-205ENST00000466830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
CMC1-205ENST00000466830 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
CMC1-205ENST00000466830 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
CMC1-205ENST00000466830 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
CMC1-205ENST00000466830 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
CMC1-205ENST00000466830 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.19
CMC1-205ENST00000466830 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
CMC1-205ENST00000466830 POLR3GLQ9BT43 218 aa16.17■□□□□ 0.18
CMC1-205ENST00000466830 MYT1Q01538 1121 aa16.16■□□□□ 0.18
CMC1-205ENST00000466830 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
CMC1-205ENST00000466830 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
CMC1-205ENST00000466830 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
CMC1-205ENST00000466830 ZNF316A6NFI3 1004 aaPredicted RBP16.04■□□□□ 0.16
CMC1-205ENST00000466830 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
CMC1-205ENST00000466830 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
CMC1-205ENST00000466830 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
CMC1-205ENST00000466830 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
CMC1-205ENST00000466830 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
CMC1-205ENST00000466830 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
CMC1-205ENST00000466830 ANP32CO43423 234 aa15.88■□□□□ 0.13
CMC1-205ENST00000466830 RB1CC1Q8TDY2 1594 aa15.85■□□□□ 0.13
CMC1-205ENST00000466830 FBLN2P98095 1184 aa15.85■□□□□ 0.13
CMC1-205ENST00000466830 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.13
CMC1-205ENST00000466830 NACADO15069 1562 aa15.82■□□□□ 0.12
CMC1-205ENST00000466830 DAXXQ9UER7 740 aaPredicted RBP15.82■□□□□ 0.12
CMC1-205ENST00000466830 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
CMC1-205ENST00000466830 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
CMC1-205ENST00000466830 EEA1Q15075 1411 aa15.76■□□□□ 0.11
CMC1-205ENST00000466830 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
CMC1-205ENST00000466830 CLIP1P30622 1438 aa15.73■□□□□ 0.11
CMC1-205ENST00000466830 BCANQ96GW7 911 aa15.73■□□□□ 0.11
CMC1-205ENST00000466830 CDK11AQ9UQ88 783 aaPredicted RBP15.73■□□□□ 0.11
CMC1-205ENST00000466830 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
CMC1-205ENST00000466830 GOLGA3Q08378 1498 aa15.67■□□□□ 0.1
CMC1-205ENST00000466830 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
CMC1-205ENST00000466830 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
CMC1-205ENST00000466830 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
CMC1-205ENST00000466830 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
CMC1-205ENST00000466830 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
CMC1-205ENST00000466830 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
CMC1-205ENST00000466830 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
CMC1-205ENST00000466830 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.09
CMC1-205ENST00000466830 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
CMC1-205ENST00000466830 RTL5Q5HYW3 569 aaPredicted RBP15.55■□□□□ 0.08
CMC1-205ENST00000466830 MTUS2Q5JR59 1369 aa15.54■□□□□ 0.08
CMC1-205ENST00000466830 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
CMC1-205ENST00000466830 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
CMC1-205ENST00000466830 KIF27Q86VH2 1401 aa15.49■□□□□ 0.07
CMC1-205ENST00000466830 MIER1Q8N108 512 aa15.47■□□□□ 0.07
CMC1-205ENST00000466830 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
CMC1-205ENST00000466830 HNRNPUQ00839 825 aaKnown RBP eCLIP15.43■□□□□ 0.06
CMC1-205ENST00000466830 FKBP8Q14318 412 aa15.43■□□□□ 0.06
CMC1-205ENST00000466830 SOGA1O94964 1423 aa15.4■□□□□ 0.06
CMC1-205ENST00000466830 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
CMC1-205ENST00000466830 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
CMC1-205ENST00000466830 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
CMC1-205ENST00000466830 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
CMC1-205ENST00000466830 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
CMC1-205ENST00000466830 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
CMC1-205ENST00000466830 CANXP27824 592 aaKnown RBP15.35■□□□□ 0.05
CMC1-205ENST00000466830 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
CMC1-205ENST00000466830 HIRIP3Q9BW71 556 aaPredicted RBP15.32■□□□□ 0.04
CMC1-205ENST00000466830 EIF4G2P78344 907 aaKnown RBP eCLIP15.3■□□□□ 0.04
CMC1-205ENST00000466830 NEFMP07197 916 aa15.29■□□□□ 0.04
CMC1-205ENST00000466830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■■■□□ 18.6
CMC1-205ENST00000466830 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
CMC1-205ENST00000466830 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
CMC1-205ENST00000466830 TMC1Q8TDI8 760 aa15.28■□□□□ 0.04
CMC1-205ENST00000466830 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
CMC1-205ENST00000466830 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
CMC1-205ENST00000466830 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms