RNA–Protein interactions for RNA: ENST00000466343.2

AC239804.1-201, humanhuman

TSL 5 BASIC

Gene AC239804.1, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239804.1-201ENST00000466343 AEBP2Q6ZN18 517 aaPredicted RBP32.19■■■□□ 2.74
AC239804.1-201ENST00000466343 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
AC239804.1-201ENST00000466343 SENP3Q9H4L4 574 aaPredicted RBP27.44■■□□□ 1.98
AC239804.1-201ENST00000466343 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
AC239804.1-201ENST00000466343 FOXD1Q16676 465 aa25.53■■□□□ 1.68
AC239804.1-201ENST00000466343 PLPPR3Q6T4P5 718 aa24.84■■□□□ 1.57
AC239804.1-201ENST00000466343 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
AC239804.1-201ENST00000466343 ADRA2BP18089 450 aa24.07■■□□□ 1.44
AC239804.1-201ENST00000466343 PIAS4Q8N2W9 510 aaPredicted RBP23.95■■□□□ 1.42
AC239804.1-201ENST00000466343 MSH5O43196 834 aa23.78■■□□□ 1.4
AC239804.1-201ENST00000466343 POTEDQ86YR6 584 aa22.66■■□□□ 1.22
AC239804.1-201ENST00000466343 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
AC239804.1-201ENST00000466343 MAPK8IP2Q13387 824 aaPredicted RBP22■■□□□ 1.11
AC239804.1-201ENST00000466343 PPP4R3CPQ6ZMV5 832 aa21.82■■□□□ 1.08
AC239804.1-201ENST00000466343 DMRT2Q9Y5R5 561 aa21.8■■□□□ 1.08
AC239804.1-201ENST00000466343 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
AC239804.1-201ENST00000466343 HOXD11P31277 338 aaPredicted RBP21.11■□□□□ 0.97
AC239804.1-201ENST00000466343 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
AC239804.1-201ENST00000466343 RNF216Q9NWF9 866 aaPredicted RBP21.05■□□□□ 0.96
AC239804.1-201ENST00000466343 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
AC239804.1-201ENST00000466343 NPM3O75607 178 aaKnown RBP20.76■□□□□ 0.91
AC239804.1-201ENST00000466343 KCNA4P22459 653 aa20.65■□□□□ 0.9
AC239804.1-201ENST00000466343 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
AC239804.1-201ENST00000466343 RNF39Q9H2S5 420 aa20.31■□□□□ 0.84
AC239804.1-201ENST00000466343 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
AC239804.1-201ENST00000466343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.82
AC239804.1-201ENST00000466343 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
AC239804.1-201ENST00000466343 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
AC239804.1-201ENST00000466343 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
AC239804.1-201ENST00000466343 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
AC239804.1-201ENST00000466343 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
AC239804.1-201ENST00000466343 CAPN15O75808 1086 aa19.35■□□□□ 0.69
AC239804.1-201ENST00000466343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
AC239804.1-201ENST00000466343 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
AC239804.1-201ENST00000466343 APLP2Q06481 763 aa19.26■□□□□ 0.67
AC239804.1-201ENST00000466343 MYCNP04198 464 aaPredicted RBP19.21■□□□□ 0.67
AC239804.1-201ENST00000466343 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
AC239804.1-201ENST00000466343 FOXD4L1Q9NU39 408 aa19.17■□□□□ 0.66
AC239804.1-201ENST00000466343 DSG3P32926 999 aa19.13■□□□□ 0.65
AC239804.1-201ENST00000466343 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
AC239804.1-201ENST00000466343 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
AC239804.1-201ENST00000466343 ZBTB22O15209 634 aa18.97■□□□□ 0.63
AC239804.1-201ENST00000466343 ABCB7O75027 752 aa18.91■□□□□ 0.62
AC239804.1-201ENST00000466343 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
AC239804.1-201ENST00000466343 POLA2Q14181 598 aa18.67■□□□□ 0.58
AC239804.1-201ENST00000466343 ATXN8OSP0DMR3 200 aa18.56■□□□□ 0.56
AC239804.1-201ENST00000466343 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
AC239804.1-201ENST00000466343 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
AC239804.1-201ENST00000466343 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
AC239804.1-201ENST00000466343 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
AC239804.1-201ENST00000466343 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
AC239804.1-201ENST00000466343 FBLN2P98095 1184 aa18.01■□□□□ 0.47
AC239804.1-201ENST00000466343 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
AC239804.1-201ENST00000466343 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
AC239804.1-201ENST00000466343 POTEHQ6S545 545 aa17.83■□□□□ 0.44
AC239804.1-201ENST00000466343 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
AC239804.1-201ENST00000466343 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
AC239804.1-201ENST00000466343 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
AC239804.1-201ENST00000466343 CHRDL2Q6WN34 429 aa17.73■□□□□ 0.43
AC239804.1-201ENST00000466343 REM2Q8IYK8 340 aaPredicted RBP17.73■□□□□ 0.43
AC239804.1-201ENST00000466343 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
AC239804.1-201ENST00000466343 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
AC239804.1-201ENST00000466343 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
AC239804.1-201ENST00000466343 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
AC239804.1-201ENST00000466343 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
AC239804.1-201ENST00000466343 PIP4P2Q8N4L2 257 aa17.37■□□□□ 0.37
AC239804.1-201ENST00000466343 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
AC239804.1-201ENST00000466343 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
AC239804.1-201ENST00000466343 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
AC239804.1-201ENST00000466343 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
AC239804.1-201ENST00000466343 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
AC239804.1-201ENST00000466343 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
AC239804.1-201ENST00000466343 HAX1O00165 279 aa17■□□□□ 0.31
AC239804.1-201ENST00000466343 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
AC239804.1-201ENST00000466343 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
AC239804.1-201ENST00000466343 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
AC239804.1-201ENST00000466343 PROM2Q8N271 834 aa16.81■□□□□ 0.28
AC239804.1-201ENST00000466343 EVX2Q03828 476 aa16.78■□□□□ 0.28
AC239804.1-201ENST00000466343 C19orf67A6NJJ6 358 aa16.75■□□□□ 0.27
AC239804.1-201ENST00000466343 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
AC239804.1-201ENST00000466343 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
AC239804.1-201ENST00000466343 FKBP8Q14318 412 aa16.69■□□□□ 0.26
AC239804.1-201ENST00000466343 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
AC239804.1-201ENST00000466343 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
AC239804.1-201ENST00000466343 MNX1P50219 401 aaPredicted RBP16.47■□□□□ 0.23
AC239804.1-201ENST00000466343 GABBR2O75899 941 aa16.43■□□□□ 0.22
AC239804.1-201ENST00000466343 MIER1Q8N108 512 aa16.42■□□□□ 0.22
AC239804.1-201ENST00000466343 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
AC239804.1-201ENST00000466343 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
AC239804.1-201ENST00000466343 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
AC239804.1-201ENST00000466343 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
AC239804.1-201ENST00000466343 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
AC239804.1-201ENST00000466343 CLCN6P51797 869 aa16.3■□□□□ 0.2
AC239804.1-201ENST00000466343 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
AC239804.1-201ENST00000466343 PHF12Q96QT6 1004 aa16.18■□□□□ 0.18
AC239804.1-201ENST00000466343 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
AC239804.1-201ENST00000466343 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
AC239804.1-201ENST00000466343 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
AC239804.1-201ENST00000466343 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
AC239804.1-201ENST00000466343 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms