RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 AEBP2Q6ZN18 517 aaPredicted RBP35.62■■■■□ 3.29
SSB-207ENST00000465871 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
SSB-207ENST00000465871 SENP3Q9H4L4 574 aaPredicted RBP30.34■■■□□ 2.45
SSB-207ENST00000465871 PHF23Q9BUL5 403 aaPredicted RBP30.12■■■□□ 2.41
SSB-207ENST00000465871 FOXD1Q16676 465 aa28.19■■■□□ 2.1
SSB-207ENST00000465871 PLPPR3Q6T4P5 718 aa27.69■■■□□ 2.02
SSB-207ENST00000465871 PPP6R1Q9UPN7 881 aa26.72■■□□□ 1.87
SSB-207ENST00000465871 ADRA2BP18089 450 aa26.67■■□□□ 1.86
SSB-207ENST00000465871 PIAS4Q8N2W9 510 aaPredicted RBP26.48■■□□□ 1.83
SSB-207ENST00000465871 MSH5O43196 834 aa26.22■■□□□ 1.79
SSB-207ENST00000465871 POTEDQ86YR6 584 aa24.69■■□□□ 1.54
SSB-207ENST00000465871 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
SSB-207ENST00000465871 MAPK8IP2Q13387 824 aaPredicted RBP24.33■■□□□ 1.49
SSB-207ENST00000465871 PPP4R3CPQ6ZMV5 832 aa24.31■■□□□ 1.48
SSB-207ENST00000465871 DMRT2Q9Y5R5 561 aa24.13■■□□□ 1.45
SSB-207ENST00000465871 CNKSR2Q8WXI2 1034 aa23.76■■□□□ 1.39
SSB-207ENST00000465871 NCBP3Q53F19 620 aaKnown RBP23.56■■□□□ 1.36
SSB-207ENST00000465871 HOXD11P31277 338 aaPredicted RBP23.45■■□□□ 1.34
SSB-207ENST00000465871 RNF216Q9NWF9 866 aaPredicted RBP23.42■■□□□ 1.34
SSB-207ENST00000465871 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
SSB-207ENST00000465871 KCNA4P22459 653 aa23.2■■□□□ 1.3
SSB-207ENST00000465871 DCAF8L1A6NGE4 600 aa23.09■■□□□ 1.29
SSB-207ENST00000465871 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
SSB-207ENST00000465871 RNF39Q9H2S5 420 aa22.41■■□□□ 1.18
SSB-207ENST00000465871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.33■■□□□ 1.179e-7■■■□□ 16.1
SSB-207ENST00000465871 CACNB1Q02641 598 aaPredicted RBP22.15■■□□□ 1.14
SSB-207ENST00000465871 C1QBPQ07021 282 aaKnown RBP22.12■■□□□ 1.13
SSB-207ENST00000465871 SLC4A2P04920 1241 aa22.02■■□□□ 1.12
SSB-207ENST00000465871 SLC4A1APQ9BWU0 796 aaKnown RBP22.01■■□□□ 1.11
SSB-207ENST00000465871 U3KPZ7 1027 aaPredicted RBP21.93■■□□□ 1.1
SSB-207ENST00000465871 FOXD4L1Q9NU39 408 aa21.52■■□□□ 1.04
SSB-207ENST00000465871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
SSB-207ENST00000465871 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
SSB-207ENST00000465871 MYCNP04198 464 aaPredicted RBP21.47■■□□□ 1.03
SSB-207ENST00000465871 SPINK5Q9NQ38 1064 aaPredicted RBP21.43■■□□□ 1.02
SSB-207ENST00000465871 APLP2Q06481 763 aa21.41■■□□□ 1.02
SSB-207ENST00000465871 SAMD1Q6SPF0 538 aaPredicted RBP21.41■■□□□ 1.02
SSB-207ENST00000465871 CAPN15O75808 1086 aa21.38■■□□□ 1.01
SSB-207ENST00000465871 ZBTB22O15209 634 aa21.35■■□□□ 1.01
SSB-207ENST00000465871 ZNF219Q9P2Y4 722 aaPredicted RBP21.19■□□□□ 0.98
SSB-207ENST00000465871 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
SSB-207ENST00000465871 DSG3P32926 999 aa21.14■□□□□ 0.97
SSB-207ENST00000465871 ABCB7O75027 752 aa20.93■□□□□ 0.94
SSB-207ENST00000465871 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
SSB-207ENST00000465871 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
SSB-207ENST00000465871 ATXN8OSP0DMR3 200 aa20.81■□□□□ 0.92
SSB-207ENST00000465871 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
SSB-207ENST00000465871 POLA2Q14181 598 aa20.7■□□□□ 0.9
SSB-207ENST00000465871 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
SSB-207ENST00000465871 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
SSB-207ENST00000465871 FBLN2P98095 1184 aa20.07■□□□□ 0.8
SSB-207ENST00000465871 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
SSB-207ENST00000465871 MKRN4PQ13434 485 aaPredicted RBP19.97■□□□□ 0.79
SSB-207ENST00000465871 AKT1S1Q96B36 256 aa19.82■□□□□ 0.76
SSB-207ENST00000465871 SPDYE2BA6NHP3 402 aa19.78■□□□□ 0.76
SSB-207ENST00000465871 SPDYE6P0CI01 402 aa19.78■□□□□ 0.76
SSB-207ENST00000465871 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
SSB-207ENST00000465871 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
SSB-207ENST00000465871 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
SSB-207ENST00000465871 SSUH2Q9Y2M2 353 aa19.58■□□□□ 0.72
SSB-207ENST00000465871 CHRDL2Q6WN34 429 aa19.53■□□□□ 0.72
SSB-207ENST00000465871 POTEHQ6S545 545 aa19.46■□□□□ 0.71
SSB-207ENST00000465871 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
SSB-207ENST00000465871 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSB-207ENST00000465871 SPDYE1Q8NFV5 336 aaPredicted RBP19.3■□□□□ 0.68
SSB-207ENST00000465871 SPDYE4A6NLX3 237 aa19.29■□□□□ 0.68
SSB-207ENST00000465871 CLEC11AQ9Y240 323 aa19.21■□□□□ 0.67
SSB-207ENST00000465871 PIP4P2Q8N4L2 257 aa19.17■□□□□ 0.66
SSB-207ENST00000465871 FXR2P51116 673 aaKnown RBP eCLIP19.14■□□□□ 0.65
SSB-207ENST00000465871 PRR29P0C7W0 189 aa18.98■□□□□ 0.63
SSB-207ENST00000465871 PROM2Q8N271 834 aa18.94■□□□□ 0.62
SSB-207ENST00000465871 STAG3Q9UJ98 1225 aa18.93■□□□□ 0.62
SSB-207ENST00000465871 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
SSB-207ENST00000465871 FKBP8Q14318 412 aa18.85■□□□□ 0.61
SSB-207ENST00000465871 CHADLQ6NUI6 762 aa18.79■□□□□ 0.6
SSB-207ENST00000465871 HAX1O00165 279 aa18.66■□□□□ 0.58
SSB-207ENST00000465871 CREBZFQ9NS37 354 aa18.63■□□□□ 0.57
SSB-207ENST00000465871 FARP1Q9Y4F1 1045 aaPredicted RBP18.58■□□□□ 0.56
SSB-207ENST00000465871 C19orf67A6NJJ6 358 aa18.51■□□□□ 0.55
SSB-207ENST00000465871 SP7Q8TDD2 431 aaPredicted RBP18.49■□□□□ 0.55
SSB-207ENST00000465871 EVX2Q03828 476 aa18.45■□□□□ 0.54
SSB-207ENST00000465871 MNX1P50219 401 aaPredicted RBP18.39■□□□□ 0.53
SSB-207ENST00000465871 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
SSB-207ENST00000465871 FBXO3Q9UK99 471 aa18.34■□□□□ 0.53
SSB-207ENST00000465871 MIER1Q8N108 512 aa18.33■□□□□ 0.52
SSB-207ENST00000465871 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSB-207ENST00000465871 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
SSB-207ENST00000465871 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.52
SSB-207ENST00000465871 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
SSB-207ENST00000465871 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
SSB-207ENST00000465871 ZBTB47Q9UFB7 747 aaPredicted RBP18.14■□□□□ 0.49
SSB-207ENST00000465871 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
SSB-207ENST00000465871 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
SSB-207ENST00000465871 GABBR2O75899 941 aa18.09■□□□□ 0.49
SSB-207ENST00000465871 CLCN6P51797 869 aa18.03■□□□□ 0.48
SSB-207ENST00000465871 RASEFQ8IZ41 740 aa17.97■□□□□ 0.47
SSB-207ENST00000465871 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
SSB-207ENST00000465871 PHF12Q96QT6 1004 aa17.95■□□□□ 0.46
SSB-207ENST00000465871 NUBP1P53384 320 aa17.93■□□□□ 0.46
SSB-207ENST00000465871 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms