RNA–Protein interactions for RNA: ENST00000465188.1

NME1-205, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-205ENST00000465188 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
NME1-205ENST00000465188 CCDC180Q9P1Z9 1646 aa18.48■□□□□ 0.55
NME1-205ENST00000465188 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
NME1-205ENST00000465188 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
NME1-205ENST00000465188 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
NME1-205ENST00000465188 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
NME1-205ENST00000465188 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
NME1-205ENST00000465188 ABCC9O60706 1549 aa17.11■□□□□ 0.33
NME1-205ENST00000465188 NACADO15069 1562 aa17.11■□□□□ 0.33
NME1-205ENST00000465188 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
NME1-205ENST00000465188 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.3
NME1-205ENST00000465188 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
NME1-205ENST00000465188 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
NME1-205ENST00000465188 RSF1Q96T23 1441 aaPredicted RBP16.55■□□□□ 0.24
NME1-205ENST00000465188 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
NME1-205ENST00000465188 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
NME1-205ENST00000465188 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
NME1-205ENST00000465188 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
NME1-205ENST00000465188 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
NME1-205ENST00000465188 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
NME1-205ENST00000465188 WIZO95785 1651 aa16.29■□□□□ 0.2
NME1-205ENST00000465188 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
NME1-205ENST00000465188 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
NME1-205ENST00000465188 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
NME1-205ENST00000465188 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
NME1-205ENST00000465188 SMARCA2P51531 1590 aa16■□□□□ 0.15
NME1-205ENST00000465188 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
NME1-205ENST00000465188 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
NME1-205ENST00000465188 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
NME1-205ENST00000465188 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
NME1-205ENST00000465188 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
NME1-205ENST00000465188 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
NME1-205ENST00000465188 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
NME1-205ENST00000465188 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
NME1-205ENST00000465188 WRNQ14191 1432 aaPredicted RBP eCLIP15.57■□□□□ 0.08
NME1-205ENST00000465188 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
NME1-205ENST00000465188 EEA1Q15075 1411 aa15.53■□□□□ 0.08
NME1-205ENST00000465188 FAM9AQ8IZU1 332 aaPredicted RBP15.53■□□□□ 0.08
NME1-205ENST00000465188 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
NME1-205ENST00000465188 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
NME1-205ENST00000465188 CFTRP13569 1480 aa15.48■□□□□ 0.07
NME1-205ENST00000465188 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
NME1-205ENST00000465188 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
NME1-205ENST00000465188 SOGA1O94964 1423 aa15.43■□□□□ 0.06
NME1-205ENST00000465188 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
NME1-205ENST00000465188 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
NME1-205ENST00000465188 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
NME1-205ENST00000465188 CUX1P39880 1505 aa15.33■□□□□ 0.04
NME1-205ENST00000465188 KIF21BO75037 1637 aa15.32■□□□□ 0.04
NME1-205ENST00000465188 GOLGA3Q08378 1498 aa15.3■□□□□ 0.04
NME1-205ENST00000465188 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
NME1-205ENST00000465188 CEP164Q9UPV0 1460 aa15.28■□□□□ 0.04
NME1-205ENST00000465188 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
NME1-205ENST00000465188 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
NME1-205ENST00000465188 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
NME1-205ENST00000465188 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
NME1-205ENST00000465188 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
NME1-205ENST00000465188 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
NME1-205ENST00000465188 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
NME1-205ENST00000465188 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
NME1-205ENST00000465188 UBTFP17480 764 aaKnown RBP15.14■□□□□ 0.01
NME1-205ENST00000465188 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
NME1-205ENST00000465188 PRXQ9BXM0 1461 aa15.14■□□□□ 0.01
NME1-205ENST00000465188 NESP48681 1621 aa15.12■□□□□ 0.01
NME1-205ENST00000465188 RAPGEF2Q9Y4G8 1499 aa15.12■□□□□ 0.01
NME1-205ENST00000465188 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
NME1-205ENST00000465188 TOPBP1Q92547 1522 aa15.07■□□□□ 0
NME1-205ENST00000465188 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
NME1-205ENST00000465188 CUX2O14529 1486 aa15.05■□□□□ -0
NME1-205ENST00000465188 CLIP1P30622 1438 aa15.04■□□□□ -0
NME1-205ENST00000465188 HRCP23327 699 aa15.03■□□□□ -0
NME1-205ENST00000465188 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
NME1-205ENST00000465188 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
NME1-205ENST00000465188 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
NME1-205ENST00000465188 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
NME1-205ENST00000465188 IGF1RP08069 1367 aa14.98□□□□□ -0.01
NME1-205ENST00000465188 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
NME1-205ENST00000465188 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
NME1-205ENST00000465188 VPS8Q8N3P4 1428 aa14.96□□□□□ -0.01
NME1-205ENST00000465188 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
NME1-205ENST00000465188 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
NME1-205ENST00000465188 CUL7Q14999 1698 aa14.91□□□□□ -0.02
NME1-205ENST00000465188 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
NME1-205ENST00000465188 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
NME1-205ENST00000465188 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
NME1-205ENST00000465188 AEBP2Q6ZN18 517 aaPredicted RBP14.85□□□□□ -0.03
NME1-205ENST00000465188 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
NME1-205ENST00000465188 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
NME1-205ENST00000465188 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
NME1-205ENST00000465188 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
NME1-205ENST00000465188 CTTNBP2Q8WZ74 1663 aa14.79□□□□□ -0.04
NME1-205ENST00000465188 WDR62O43379 1518 aa14.78□□□□□ -0.04
NME1-205ENST00000465188 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
NME1-205ENST00000465188 APLP2Q06481 763 aa14.76□□□□□ -0.05
NME1-205ENST00000465188 PBRM1Q86U86 1689 aa14.75□□□□□ -0.05
NME1-205ENST00000465188 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
NME1-205ENST00000465188 RANGAP1P46060 587 aaPredicted RBP14.74□□□□□ -0.05
NME1-205ENST00000465188 EFCAB5A4FU69 1503 aa14.73□□□□□ -0.05
NME1-205ENST00000465188 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
NME1-205ENST00000465188 MAP3K1Q13233 1512 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms