RNA–Protein interactions for RNA: ENST00000462959.2

AC016747.4-201, humanhuman

TSL 2 BASIC

Gene AC016747.4, Length 1,383 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016747.4-201ENST00000462959 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
AC016747.4-201ENST00000462959 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
AC016747.4-201ENST00000462959 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
AC016747.4-201ENST00000462959 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
AC016747.4-201ENST00000462959 FOXD1Q16676 465 aa19.25■□□□□ 0.67
AC016747.4-201ENST00000462959 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
AC016747.4-201ENST00000462959 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
AC016747.4-201ENST00000462959 ADRA2BP18089 450 aa18.04■□□□□ 0.48
AC016747.4-201ENST00000462959 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
AC016747.4-201ENST00000462959 MSH5O43196 834 aa17.94■□□□□ 0.46
AC016747.4-201ENST00000462959 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
AC016747.4-201ENST00000462959 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
AC016747.4-201ENST00000462959 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
AC016747.4-201ENST00000462959 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
AC016747.4-201ENST00000462959 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
AC016747.4-201ENST00000462959 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
AC016747.4-201ENST00000462959 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
AC016747.4-201ENST00000462959 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
AC016747.4-201ENST00000462959 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
AC016747.4-201ENST00000462959 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
AC016747.4-201ENST00000462959 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
AC016747.4-201ENST00000462959 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
AC016747.4-201ENST00000462959 KCNA4P22459 653 aa15.31■□□□□ 0.04
AC016747.4-201ENST00000462959 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
AC016747.4-201ENST00000462959 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
AC016747.4-201ENST00000462959 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
AC016747.4-201ENST00000462959 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
AC016747.4-201ENST00000462959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.011e-8■■■□□ 15.2
AC016747.4-201ENST00000462959 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
AC016747.4-201ENST00000462959 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
AC016747.4-201ENST00000462959 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
AC016747.4-201ENST00000462959 CAPN15O75808 1086 aa14.5□□□□□ -0.09
AC016747.4-201ENST00000462959 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
AC016747.4-201ENST00000462959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
AC016747.4-201ENST00000462959 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
AC016747.4-201ENST00000462959 DSG3P32926 999 aa14.41□□□□□ -0.1
AC016747.4-201ENST00000462959 APLP2Q06481 763 aa14.39□□□□□ -0.11
AC016747.4-201ENST00000462959 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
AC016747.4-201ENST00000462959 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
AC016747.4-201ENST00000462959 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
AC016747.4-201ENST00000462959 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
AC016747.4-201ENST00000462959 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
AC016747.4-201ENST00000462959 ABCB7O75027 752 aa14.19□□□□□ -0.14
AC016747.4-201ENST00000462959 ZBTB22O15209 634 aa14.09□□□□□ -0.15
AC016747.4-201ENST00000462959 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
AC016747.4-201ENST00000462959 POLA2Q14181 598 aa13.96□□□□□ -0.17
AC016747.4-201ENST00000462959 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
AC016747.4-201ENST00000462959 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
AC016747.4-201ENST00000462959 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
AC016747.4-201ENST00000462959 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
AC016747.4-201ENST00000462959 POTEHQ6S545 545 aa13.58□□□□□ -0.24
AC016747.4-201ENST00000462959 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
AC016747.4-201ENST00000462959 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
AC016747.4-201ENST00000462959 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
AC016747.4-201ENST00000462959 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
AC016747.4-201ENST00000462959 FBLN2P98095 1184 aa13.41□□□□□ -0.26
AC016747.4-201ENST00000462959 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
AC016747.4-201ENST00000462959 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
AC016747.4-201ENST00000462959 ABCC9O60706 1549 aa13.34□□□□□ -0.27
AC016747.4-201ENST00000462959 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
AC016747.4-201ENST00000462959 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
AC016747.4-201ENST00000462959 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
AC016747.4-201ENST00000462959 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
AC016747.4-201ENST00000462959 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
AC016747.4-201ENST00000462959 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
AC016747.4-201ENST00000462959 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
AC016747.4-201ENST00000462959 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
AC016747.4-201ENST00000462959 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
AC016747.4-201ENST00000462959 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
AC016747.4-201ENST00000462959 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
AC016747.4-201ENST00000462959 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC016747.4-201ENST00000462959 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
AC016747.4-201ENST00000462959 HAX1O00165 279 aa12.81□□□□□ -0.36
AC016747.4-201ENST00000462959 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
AC016747.4-201ENST00000462959 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
AC016747.4-201ENST00000462959 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
AC016747.4-201ENST00000462959 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.37
AC016747.4-201ENST00000462959 NACADO15069 1562 aa12.72□□□□□ -0.37
AC016747.4-201ENST00000462959 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
AC016747.4-201ENST00000462959 DCAF8L2P0C7V8 631 aa12.7□□□□□ -0.38
AC016747.4-201ENST00000462959 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
AC016747.4-201ENST00000462959 EVX2Q03828 476 aa12.69□□□□□ -0.38
AC016747.4-201ENST00000462959 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
AC016747.4-201ENST00000462959 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
AC016747.4-201ENST00000462959 MYO15BQ96JP2 1530 aa12.61□□□□□ -0.39
AC016747.4-201ENST00000462959 UNC13AQ9UPW8 1703 aa12.6□□□□□ -0.39
AC016747.4-201ENST00000462959 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
AC016747.4-201ENST00000462959 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
AC016747.4-201ENST00000462959 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
AC016747.4-201ENST00000462959 PROM2Q8N271 834 aa12.51□□□□□ -0.41
AC016747.4-201ENST00000462959 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.41
AC016747.4-201ENST00000462959 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
AC016747.4-201ENST00000462959 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
AC016747.4-201ENST00000462959 GABBR2O75899 941 aa12.4□□□□□ -0.42
AC016747.4-201ENST00000462959 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
AC016747.4-201ENST00000462959 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
AC016747.4-201ENST00000462959 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
AC016747.4-201ENST00000462959 FKBP8Q14318 412 aa12.27□□□□□ -0.45
AC016747.4-201ENST00000462959 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
AC016747.4-201ENST00000462959 CLCN6P51797 869 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms