RNA–Protein interactions for RNA: ENST00000462938.5

PDE1A-206, Transcript of phosphodiesterase 1A, humanhuman

TSL 4

Gene PDE1A, Length 532 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-206ENST00000462938 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
PDE1A-206ENST00000462938 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
PDE1A-206ENST00000462938 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
PDE1A-206ENST00000462938 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
PDE1A-206ENST00000462938 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
PDE1A-206ENST00000462938 FOXD1Q16676 465 aa14.4□□□□□ -0.1
PDE1A-206ENST00000462938 MSH5O43196 834 aa13.87□□□□□ -0.19
PDE1A-206ENST00000462938 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
PDE1A-206ENST00000462938 CACNB1Q02641 598 aaPredicted RBP12.67□□□□□ -0.38
PDE1A-206ENST00000462938 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
PDE1A-206ENST00000462938 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
PDE1A-206ENST00000462938 ADRA2BP18089 450 aa12.46□□□□□ -0.41
PDE1A-206ENST00000462938 POTEHQ6S545 545 aa12□□□□□ -0.49
PDE1A-206ENST00000462938 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
PDE1A-206ENST00000462938 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
PDE1A-206ENST00000462938 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
PDE1A-206ENST00000462938 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
PDE1A-206ENST00000462938 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
PDE1A-206ENST00000462938 SCAF1Q9H7N4 1312 aaKnown RBP11.31□□□□□ -0.6
PDE1A-206ENST00000462938 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
PDE1A-206ENST00000462938 PPP4R3CPQ6ZMV5 832 aa10.95□□□□□ -0.66
PDE1A-206ENST00000462938 KCNA4P22459 653 aa10.89□□□□□ -0.67
PDE1A-206ENST00000462938 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
PDE1A-206ENST00000462938 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
PDE1A-206ENST00000462938 SP7Q8TDD2 431 aaPredicted RBP10.68□□□□□ -0.7
PDE1A-206ENST00000462938 NCBP3Q53F19 620 aaKnown RBP10.67□□□□□ -0.7
PDE1A-206ENST00000462938 DSG3P32926 999 aa10.63□□□□□ -0.71
PDE1A-206ENST00000462938 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
PDE1A-206ENST00000462938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDE1A-206ENST00000462938 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
PDE1A-206ENST00000462938 EHMT2Q96KQ7 1210 aa10.42□□□□□ -0.74
PDE1A-206ENST00000462938 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
PDE1A-206ENST00000462938 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
PDE1A-206ENST00000462938 CAPN15O75808 1086 aa10.4□□□□□ -0.74
PDE1A-206ENST00000462938 CHRDL2Q6WN34 429 aa10.4□□□□□ -0.74
PDE1A-206ENST00000462938 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
PDE1A-206ENST00000462938 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
PDE1A-206ENST00000462938 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
PDE1A-206ENST00000462938 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
PDE1A-206ENST00000462938 ABCB7O75027 752 aa10.09□□□□□ -0.79
PDE1A-206ENST00000462938 HAX1O00165 279 aa10.06□□□□□ -0.8
PDE1A-206ENST00000462938 ZBTB22O15209 634 aa10.06□□□□□ -0.8
PDE1A-206ENST00000462938 LHX8Q68G74 356 aa10□□□□□ -0.81
PDE1A-206ENST00000462938 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
PDE1A-206ENST00000462938 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
PDE1A-206ENST00000462938 PIP4P2Q8N4L2 257 aa9.92□□□□□ -0.82
PDE1A-206ENST00000462938 EVX2Q03828 476 aa9.89□□□□□ -0.83
PDE1A-206ENST00000462938 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
PDE1A-206ENST00000462938 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
PDE1A-206ENST00000462938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.78□□□□□ -0.84
PDE1A-206ENST00000462938 APLP2Q06481 763 aa9.78□□□□□ -0.84
PDE1A-206ENST00000462938 HNRNPUL2Q1KMD3 747 aaKnown RBP9.78□□□□□ -0.84
PDE1A-206ENST00000462938 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
PDE1A-206ENST00000462938 MYCNP04198 464 aaPredicted RBP9.68□□□□□ -0.86
PDE1A-206ENST00000462938 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.86
PDE1A-206ENST00000462938 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDE1A-206ENST00000462938 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
PDE1A-206ENST00000462938 REM2Q8IYK8 340 aaPredicted RBP9.59□□□□□ -0.87
PDE1A-206ENST00000462938 GABBR2O75899 941 aa9.56□□□□□ -0.88
PDE1A-206ENST00000462938 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
PDE1A-206ENST00000462938 POTEMA6NI47 508 aa9.49□□□□□ -0.89
PDE1A-206ENST00000462938 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
PDE1A-206ENST00000462938 POLA2Q14181 598 aa9.41□□□□□ -0.9
PDE1A-206ENST00000462938 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
PDE1A-206ENST00000462938 POTEIP0CG38 1075 aa9.38□□□□□ -0.91
PDE1A-206ENST00000462938 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
PDE1A-206ENST00000462938 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
PDE1A-206ENST00000462938 ZBTB12Q9Y330 459 aaPredicted RBP9.26□□□□□ -0.93
PDE1A-206ENST00000462938 PRKAR2AP13861 404 aaKnown RBP9.25□□□□□ -0.93
PDE1A-206ENST00000462938 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
PDE1A-206ENST00000462938 FKBP8Q14318 412 aa9.2□□□□□ -0.94
PDE1A-206ENST00000462938 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
PDE1A-206ENST00000462938 FBLN2P98095 1184 aa9.12□□□□□ -0.95
PDE1A-206ENST00000462938 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
PDE1A-206ENST00000462938 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
PDE1A-206ENST00000462938 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
PDE1A-206ENST00000462938 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
PDE1A-206ENST00000462938 MKRN4PQ13434 485 aaPredicted RBP8.97□□□□□ -0.97
PDE1A-206ENST00000462938 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
PDE1A-206ENST00000462938 PROM2Q8N271 834 aa8.96□□□□□ -0.98
PDE1A-206ENST00000462938 SPDYE2BA6NHP3 402 aa8.94□□□□□ -0.98
PDE1A-206ENST00000462938 SPDYE6P0CI01 402 aa8.94□□□□□ -0.98
PDE1A-206ENST00000462938 SPDYE2Q495Y8 402 aa8.94□□□□□ -0.98
PDE1A-206ENST00000462938 CLEC11AQ9Y240 323 aa8.94□□□□□ -0.98
PDE1A-206ENST00000462938 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
PDE1A-206ENST00000462938 CLCN6P51797 869 aa8.9□□□□□ -0.98
PDE1A-206ENST00000462938 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
PDE1A-206ENST00000462938 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
PDE1A-206ENST00000462938 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
PDE1A-206ENST00000462938 FAM163AQ96GL9 167 aaPredicted RBP8.87□□□□□ -0.99
PDE1A-206ENST00000462938 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
PDE1A-206ENST00000462938 FBXO3Q9UK99 471 aa8.83□□□□□ -1
PDE1A-206ENST00000462938 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
PDE1A-206ENST00000462938 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
PDE1A-206ENST00000462938 SLC24A1O60721 1099 aa8.73□□□□□ -1.01
PDE1A-206ENST00000462938 MMRN1Q13201 1228 aa8.73□□□□□ -1.01
PDE1A-206ENST00000462938 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
PDE1A-206ENST00000462938 POTEJP0CG39 1038 aa8.72□□□□□ -1.01
PDE1A-206ENST00000462938 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
PDE1A-206ENST00000462938 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms