RNA–Protein interactions for RNA: ENST00000462701.1

RPS3AP41-201, Transcript of ribosomal protein S3a pseudogene 41, humanhuman

BASIC

Gene RPS3AP41, Length 778 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP41-201ENST00000462701 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
RPS3AP41-201ENST00000462701 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
RPS3AP41-201ENST00000462701 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
RPS3AP41-201ENST00000462701 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.04
RPS3AP41-201ENST00000462701 FOXD1Q16676 465 aa14.37□□□□□ -0.11
RPS3AP41-201ENST00000462701 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
RPS3AP41-201ENST00000462701 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
RPS3AP41-201ENST00000462701 MSH5O43196 834 aa13.52□□□□□ -0.25
RPS3AP41-201ENST00000462701 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
RPS3AP41-201ENST00000462701 PPP6R1Q9UPN7 881 aa13.46□□□□□ -0.25
RPS3AP41-201ENST00000462701 ADRA2BP18089 450 aa13.43□□□□□ -0.26
RPS3AP41-201ENST00000462701 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
RPS3AP41-201ENST00000462701 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
RPS3AP41-201ENST00000462701 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
RPS3AP41-201ENST00000462701 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
RPS3AP41-201ENST00000462701 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
RPS3AP41-201ENST00000462701 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
RPS3AP41-201ENST00000462701 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
RPS3AP41-201ENST00000462701 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
RPS3AP41-201ENST00000462701 ABCC9O60706 1549 aa11.83□□□□□ -0.52
RPS3AP41-201ENST00000462701 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
RPS3AP41-201ENST00000462701 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
RPS3AP41-201ENST00000462701 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
RPS3AP41-201ENST00000462701 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
RPS3AP41-201ENST00000462701 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.57
RPS3AP41-201ENST00000462701 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
RPS3AP41-201ENST00000462701 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
RPS3AP41-201ENST00000462701 KCNA4P22459 653 aa11.39□□□□□ -0.59
RPS3AP41-201ENST00000462701 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
RPS3AP41-201ENST00000462701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPS3AP41-201ENST00000462701 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
RPS3AP41-201ENST00000462701 NACADO15069 1562 aa11.05□□□□□ -0.64
RPS3AP41-201ENST00000462701 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
RPS3AP41-201ENST00000462701 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
RPS3AP41-201ENST00000462701 SLC4A2P04920 1241 aa10.96□□□□□ -0.65
RPS3AP41-201ENST00000462701 POTEHQ6S545 545 aa10.95□□□□□ -0.66
RPS3AP41-201ENST00000462701 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPS3AP41-201ENST00000462701 BICRAQ9NZM4 1560 aa10.89□□□□□ -0.67
RPS3AP41-201ENST00000462701 DCAF8L2P0C7V8 631 aa10.88□□□□□ -0.67
RPS3AP41-201ENST00000462701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
RPS3AP41-201ENST00000462701 APLP2Q06481 763 aa10.85□□□□□ -0.67
RPS3AP41-201ENST00000462701 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
RPS3AP41-201ENST00000462701 CAPN15O75808 1086 aa10.84□□□□□ -0.67
RPS3AP41-201ENST00000462701 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
RPS3AP41-201ENST00000462701 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
RPS3AP41-201ENST00000462701 DSG3P32926 999 aa10.77□□□□□ -0.69
RPS3AP41-201ENST00000462701 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
RPS3AP41-201ENST00000462701 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
RPS3AP41-201ENST00000462701 ZNF219Q9P2Y4 722 aaPredicted RBP10.72□□□□□ -0.69
RPS3AP41-201ENST00000462701 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
RPS3AP41-201ENST00000462701 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
RPS3AP41-201ENST00000462701 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
RPS3AP41-201ENST00000462701 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
RPS3AP41-201ENST00000462701 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
RPS3AP41-201ENST00000462701 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
RPS3AP41-201ENST00000462701 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
RPS3AP41-201ENST00000462701 EIF4G1Q04637 1599 aaKnown RBP10.63□□□□□ -0.71
RPS3AP41-201ENST00000462701 DCAF1Q9Y4B6 1507 aa10.63□□□□□ -0.71
RPS3AP41-201ENST00000462701 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
RPS3AP41-201ENST00000462701 ABCB7O75027 752 aa10.56□□□□□ -0.72
RPS3AP41-201ENST00000462701 ZBTB22O15209 634 aa10.54□□□□□ -0.72
RPS3AP41-201ENST00000462701 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
RPS3AP41-201ENST00000462701 POLA2Q14181 598 aa10.42□□□□□ -0.74
RPS3AP41-201ENST00000462701 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
RPS3AP41-201ENST00000462701 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
RPS3AP41-201ENST00000462701 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
RPS3AP41-201ENST00000462701 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
RPS3AP41-201ENST00000462701 CUX2O14529 1486 aa10.26□□□□□ -0.77
RPS3AP41-201ENST00000462701 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
RPS3AP41-201ENST00000462701 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
RPS3AP41-201ENST00000462701 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
RPS3AP41-201ENST00000462701 NCAPD3P42695 1498 aa10.18□□□□□ -0.78
RPS3AP41-201ENST00000462701 ATAD2BQ9ULI0 1458 aa10.14□□□□□ -0.79
RPS3AP41-201ENST00000462701 HMGXB3Q12766 1538 aa10.13□□□□□ -0.79
RPS3AP41-201ENST00000462701 NESP48681 1621 aa10.11□□□□□ -0.79
RPS3AP41-201ENST00000462701 SMARCA4P51532 1647 aa10.11□□□□□ -0.79
RPS3AP41-201ENST00000462701 SMARCA2P51531 1590 aa10.11□□□□□ -0.79
RPS3AP41-201ENST00000462701 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
RPS3AP41-201ENST00000462701 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
RPS3AP41-201ENST00000462701 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
RPS3AP41-201ENST00000462701 OSCARQ8IYS5 282 aa10.06□□□□□ -0.8
RPS3AP41-201ENST00000462701 FBLN2P98095 1184 aa10.04□□□□□ -0.8
RPS3AP41-201ENST00000462701 BAZ1BQ9UIG0 1483 aaKnown RBP10.04□□□□□ -0.8
RPS3AP41-201ENST00000462701 KIF21AQ7Z4S6 1674 aa10.03□□□□□ -0.8
RPS3AP41-201ENST00000462701 PEG3Q9GZU2 1588 aa10.01□□□□□ -0.81
RPS3AP41-201ENST00000462701 BAZ1AQ9NRL2 1556 aaPredicted RBP10.01□□□□□ -0.81
RPS3AP41-201ENST00000462701 LAMC3Q9Y6N6 1575 aa10.01□□□□□ -0.81
RPS3AP41-201ENST00000462701 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
RPS3AP41-201ENST00000462701 REM2Q8IYK8 340 aaPredicted RBP9.97□□□□□ -0.81
RPS3AP41-201ENST00000462701 SPDYE2BA6NHP3 402 aa9.94□□□□□ -0.82
RPS3AP41-201ENST00000462701 SPDYE6P0CI01 402 aa9.94□□□□□ -0.82
RPS3AP41-201ENST00000462701 SPDYE2Q495Y8 402 aa9.94□□□□□ -0.82
RPS3AP41-201ENST00000462701 MROH2BQ7Z745 1585 aa9.93□□□□□ -0.82
RPS3AP41-201ENST00000462701 PDS5BQ9NTI5 1447 aa9.91□□□□□ -0.82
RPS3AP41-201ENST00000462701 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
RPS3AP41-201ENST00000462701 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
RPS3AP41-201ENST00000462701 WDR62O43379 1518 aa9.88□□□□□ -0.83
RPS3AP41-201ENST00000462701 MRC2Q9UBG0 1479 aa9.88□□□□□ -0.83
RPS3AP41-201ENST00000462701 CADPSQ9ULU8 1353 aa9.85□□□□□ -0.83
RPS3AP41-201ENST00000462701 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms