RNA–Protein interactions for RNA: ENST00000462687.1

RIT1-204, Transcript of Ras like without CAAX 1, humanhuman

TSL 3

Gene RIT1, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIT1-204ENST00000462687 AEBP2Q6ZN18 517 aaPredicted RBP40.67■■■■■ 4.1
RIT1-204ENST00000462687 CHIC1Q5VXU3 224 aa38.76■■■■□ 3.8
RIT1-204ENST00000462687 SENP3Q9H4L4 574 aaPredicted RBP34.68■■■■□ 3.14
RIT1-204ENST00000462687 PHF23Q9BUL5 403 aaPredicted RBP34.27■■■■□ 3.08
RIT1-204ENST00000462687 FOXD1Q16676 465 aa32.31■■■□□ 2.76
RIT1-204ENST00000462687 PLPPR3Q6T4P5 718 aa31.05■■■□□ 2.56
RIT1-204ENST00000462687 PPP6R1Q9UPN7 881 aa30.31■■■□□ 2.44
RIT1-204ENST00000462687 ADRA2BP18089 450 aa30.25■■■□□ 2.43
RIT1-204ENST00000462687 PIAS4Q8N2W9 510 aaPredicted RBP30.25■■■□□ 2.43
RIT1-204ENST00000462687 MSH5O43196 834 aa30.19■■■□□ 2.42
RIT1-204ENST00000462687 POTEDQ86YR6 584 aa29.23■■■□□ 2.27
RIT1-204ENST00000462687 MAPK8IP2Q13387 824 aaPredicted RBP27.75■■■□□ 2.03
RIT1-204ENST00000462687 SCAF1Q9H7N4 1312 aaKnown RBP27.69■■■□□ 2.02
RIT1-204ENST00000462687 DMRT2Q9Y5R5 561 aa27.52■■■□□ 2
RIT1-204ENST00000462687 PPP4R3CPQ6ZMV5 832 aa27.25■■□□□ 1.95
RIT1-204ENST00000462687 CNKSR2Q8WXI2 1034 aa26.69■■□□□ 1.86
RIT1-204ENST00000462687 HOXD11P31277 338 aaPredicted RBP26.55■■□□□ 1.84
RIT1-204ENST00000462687 DCAF8L1A6NGE4 600 aa26.46■■□□□ 1.83
RIT1-204ENST00000462687 RNF216Q9NWF9 866 aaPredicted RBP26.4■■□□□ 1.82
RIT1-204ENST00000462687 NCBP3Q53F19 620 aaKnown RBP26.25■■□□□ 1.79
RIT1-204ENST00000462687 CACNB1Q02641 598 aaPredicted RBP25.86■■□□□ 1.73
RIT1-204ENST00000462687 NPM3O75607 178 aaKnown RBP25.84■■□□□ 1.73
RIT1-204ENST00000462687 RNF39Q9H2S5 420 aa25.76■■□□□ 1.71
RIT1-204ENST00000462687 NISCHQ9Y2I1 1504 aa25.72■■□□□ 1.71
RIT1-204ENST00000462687 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
RIT1-204ENST00000462687 KCNA4P22459 653 aa25.48■■□□□ 1.67
RIT1-204ENST00000462687 C1QBPQ07021 282 aaKnown RBP25.4■■□□□ 1.66
RIT1-204ENST00000462687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.36■■□□□ 1.65
RIT1-204ENST00000462687 U3KPZ7 1027 aaPredicted RBP24.8■■□□□ 1.56
RIT1-204ENST00000462687 SLC4A2P04920 1241 aa24.64■■□□□ 1.54
RIT1-204ENST00000462687 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
RIT1-204ENST00000462687 CAPN15O75808 1086 aa24.4■■□□□ 1.5
RIT1-204ENST00000462687 DSG3P32926 999 aa24.18■■□□□ 1.46
RIT1-204ENST00000462687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
RIT1-204ENST00000462687 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
RIT1-204ENST00000462687 APLP2Q06481 763 aa24.15■■□□□ 1.46
RIT1-204ENST00000462687 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
RIT1-204ENST00000462687 TRHP20396 242 aaPredicted RBP24.05■■□□□ 1.44
RIT1-204ENST00000462687 SAMD1Q6SPF0 538 aaPredicted RBP24.03■■□□□ 1.44
RIT1-204ENST00000462687 ZNF219Q9P2Y4 722 aaPredicted RBP23.97■■□□□ 1.43
RIT1-204ENST00000462687 MYCNP04198 464 aaPredicted RBP23.91■■□□□ 1.42
RIT1-204ENST00000462687 ABCB7O75027 752 aa23.85■■□□□ 1.41
RIT1-204ENST00000462687 FOXD4L1Q9NU39 408 aa23.74■■□□□ 1.39
RIT1-204ENST00000462687 POLA2Q14181 598 aa23.42■■□□□ 1.34
RIT1-204ENST00000462687 ZBTB22O15209 634 aa23.4■■□□□ 1.34
RIT1-204ENST00000462687 ATF5Q9Y2D1 282 aaPredicted RBP23.35■■□□□ 1.33
RIT1-204ENST00000462687 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
RIT1-204ENST00000462687 ATXN8OSP0DMR3 200 aa22.98■■□□□ 1.27
RIT1-204ENST00000462687 POTEHQ6S545 545 aa22.94■■□□□ 1.26
RIT1-204ENST00000462687 ZBTB12Q9Y330 459 aaPredicted RBP22.93■■□□□ 1.26
RIT1-204ENST00000462687 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
RIT1-204ENST00000462687 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
RIT1-204ENST00000462687 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
RIT1-204ENST00000462687 ABCC9O60706 1549 aa22.56■■□□□ 1.2
RIT1-204ENST00000462687 CHRDL2Q6WN34 429 aa22.52■■□□□ 1.2
RIT1-204ENST00000462687 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
RIT1-204ENST00000462687 FBLN2P98095 1184 aa22.46■■□□□ 1.19
RIT1-204ENST00000462687 REM2Q8IYK8 340 aaPredicted RBP22.37■■□□□ 1.17
RIT1-204ENST00000462687 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
RIT1-204ENST00000462687 MKRN4PQ13434 485 aaPredicted RBP22.26■■□□□ 1.15
RIT1-204ENST00000462687 SPDYE2BA6NHP3 402 aa22.23■■□□□ 1.15
RIT1-204ENST00000462687 SPDYE6P0CI01 402 aa22.23■■□□□ 1.15
RIT1-204ENST00000462687 SPDYE2Q495Y8 402 aa22.23■■□□□ 1.15
RIT1-204ENST00000462687 PITPNM1O00562 1244 aa22.13■■□□□ 1.13
RIT1-204ENST00000462687 ZNF692Q9BU19 519 aaPredicted RBP22.02■■□□□ 1.12
RIT1-204ENST00000462687 PIP4P2Q8N4L2 257 aa22.01■■□□□ 1.11
RIT1-204ENST00000462687 SSUH2Q9Y2M2 353 aa21.93■■□□□ 1.1
RIT1-204ENST00000462687 FXR2P51116 673 aaKnown RBP eCLIP21.89■■□□□ 1.09
RIT1-204ENST00000462687 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.09
RIT1-204ENST00000462687 SPDYE1Q8NFV5 336 aaPredicted RBP21.83■■□□□ 1.09
RIT1-204ENST00000462687 CLEC11AQ9Y240 323 aa21.82■■□□□ 1.08
RIT1-204ENST00000462687 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
RIT1-204ENST00000462687 HAX1O00165 279 aa21.62■■□□□ 1.05
RIT1-204ENST00000462687 RB1CC1Q8TDY2 1594 aa21.59■■□□□ 1.05
RIT1-204ENST00000462687 PRKAR2AP13861 404 aaKnown RBP21.58■■□□□ 1.05
RIT1-204ENST00000462687 SP7Q8TDD2 431 aaPredicted RBP21.58■■□□□ 1.05
RIT1-204ENST00000462687 NACADO15069 1562 aa21.51■■□□□ 1.03
RIT1-204ENST00000462687 PRR29P0C7W0 189 aa21.46■■□□□ 1.03
RIT1-204ENST00000462687 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
RIT1-204ENST00000462687 CHADLQ6NUI6 762 aa21.36■■□□□ 1.01
RIT1-204ENST00000462687 SPDYE4A6NLX3 237 aa21.32■■□□□ 1
RIT1-204ENST00000462687 EVX2Q03828 476 aa21.32■■□□□ 1
RIT1-204ENST00000462687 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
RIT1-204ENST00000462687 C19orf67A6NJJ6 358 aa21.19■□□□□ 0.98
RIT1-204ENST00000462687 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
RIT1-204ENST00000462687 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
RIT1-204ENST00000462687 STAG3Q9UJ98 1225 aa21.12■□□□□ 0.97
RIT1-204ENST00000462687 FARP1Q9Y4F1 1045 aaPredicted RBP21.05■□□□□ 0.96
RIT1-204ENST00000462687 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
RIT1-204ENST00000462687 CREBZFQ9NS37 354 aa20.93■□□□□ 0.94
RIT1-204ENST00000462687 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
RIT1-204ENST00000462687 CD44P16070 742 aaKnown RBP20.9■□□□□ 0.94
RIT1-204ENST00000462687 GABBR2O75899 941 aa20.86■□□□□ 0.93
RIT1-204ENST00000462687 PROM2Q8N271 834 aa20.76■□□□□ 0.91
RIT1-204ENST00000462687 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.89
RIT1-204ENST00000462687 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
RIT1-204ENST00000462687 MNX1P50219 401 aaPredicted RBP20.56■□□□□ 0.88
RIT1-204ENST00000462687 CLCN6P51797 869 aa20.56■□□□□ 0.88
RIT1-204ENST00000462687 ZNF579Q8NAF0 562 aaKnown RBP20.55■□□□□ 0.88
RIT1-204ENST00000462687 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms