RNA–Protein interactions for RNA: ENST00000462222.1

SEC23IP-204, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-204ENST00000462222 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
SEC23IP-204ENST00000462222 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
SEC23IP-204ENST00000462222 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.82
SEC23IP-204ENST00000462222 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
SEC23IP-204ENST00000462222 FOXD1Q16676 465 aa24.57■■□□□ 1.52
SEC23IP-204ENST00000462222 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
SEC23IP-204ENST00000462222 MSH5O43196 834 aa23.3■■□□□ 1.32
SEC23IP-204ENST00000462222 PIAS4Q8N2W9 510 aaPredicted RBP22.87■■□□□ 1.25
SEC23IP-204ENST00000462222 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
SEC23IP-204ENST00000462222 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
SEC23IP-204ENST00000462222 ADRA2BP18089 450 aa22.46■■□□□ 1.19
SEC23IP-204ENST00000462222 DMRT2Q9Y5R5 561 aa20.81■□□□□ 0.92
SEC23IP-204ENST00000462222 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
SEC23IP-204ENST00000462222 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
SEC23IP-204ENST00000462222 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
SEC23IP-204ENST00000462222 DCAF8L1A6NGE4 600 aa19.97■□□□□ 0.79
SEC23IP-204ENST00000462222 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
SEC23IP-204ENST00000462222 HOXD11P31277 338 aaPredicted RBP19.87■□□□□ 0.77
SEC23IP-204ENST00000462222 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
SEC23IP-204ENST00000462222 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
SEC23IP-204ENST00000462222 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
SEC23IP-204ENST00000462222 C1QBPQ07021 282 aaKnown RBP19.52■□□□□ 0.72
SEC23IP-204ENST00000462222 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
SEC23IP-204ENST00000462222 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
SEC23IP-204ENST00000462222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.62
SEC23IP-204ENST00000462222 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
SEC23IP-204ENST00000462222 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
SEC23IP-204ENST00000462222 CAPN15O75808 1086 aa18.34■□□□□ 0.53
SEC23IP-204ENST00000462222 DSG3P32926 999 aa18.34■□□□□ 0.53
SEC23IP-204ENST00000462222 POTEHQ6S545 545 aa18.33■□□□□ 0.52
SEC23IP-204ENST00000462222 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
SEC23IP-204ENST00000462222 APLP2Q06481 763 aa18.04■□□□□ 0.48
SEC23IP-204ENST00000462222 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
SEC23IP-204ENST00000462222 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
SEC23IP-204ENST00000462222 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
SEC23IP-204ENST00000462222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
SEC23IP-204ENST00000462222 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
SEC23IP-204ENST00000462222 KCNA4P22459 653 aa17.82■□□□□ 0.44
SEC23IP-204ENST00000462222 ABCB7O75027 752 aa17.81■□□□□ 0.44
SEC23IP-204ENST00000462222 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
SEC23IP-204ENST00000462222 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
SEC23IP-204ENST00000462222 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
SEC23IP-204ENST00000462222 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
SEC23IP-204ENST00000462222 POLA2Q14181 598 aa17.33■□□□□ 0.36
SEC23IP-204ENST00000462222 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
SEC23IP-204ENST00000462222 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
SEC23IP-204ENST00000462222 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
SEC23IP-204ENST00000462222 REM2Q8IYK8 340 aaPredicted RBP16.86■□□□□ 0.29
SEC23IP-204ENST00000462222 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
SEC23IP-204ENST00000462222 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
SEC23IP-204ENST00000462222 PIP4P2Q8N4L2 257 aa16.79■□□□□ 0.28
SEC23IP-204ENST00000462222 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
SEC23IP-204ENST00000462222 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
SEC23IP-204ENST00000462222 HAX1O00165 279 aa16.67■□□□□ 0.26
SEC23IP-204ENST00000462222 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEC23IP-204ENST00000462222 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
SEC23IP-204ENST00000462222 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
SEC23IP-204ENST00000462222 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
SEC23IP-204ENST00000462222 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
SEC23IP-204ENST00000462222 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
SEC23IP-204ENST00000462222 FBLN2P98095 1184 aa16.38■□□□□ 0.21
SEC23IP-204ENST00000462222 ZBTB22O15209 634 aa16.33■□□□□ 0.2
SEC23IP-204ENST00000462222 EVX2Q03828 476 aa16.32■□□□□ 0.2
SEC23IP-204ENST00000462222 SPDYE1Q8NFV5 336 aaPredicted RBP16.27■□□□□ 0.2
SEC23IP-204ENST00000462222 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
SEC23IP-204ENST00000462222 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
SEC23IP-204ENST00000462222 C19orf67A6NJJ6 358 aa16.13■□□□□ 0.17
SEC23IP-204ENST00000462222 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
SEC23IP-204ENST00000462222 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
SEC23IP-204ENST00000462222 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
SEC23IP-204ENST00000462222 GABBR2O75899 941 aa16.01■□□□□ 0.15
SEC23IP-204ENST00000462222 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
SEC23IP-204ENST00000462222 LHX8Q68G74 356 aa15.91■□□□□ 0.14
SEC23IP-204ENST00000462222 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
SEC23IP-204ENST00000462222 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEC23IP-204ENST00000462222 CLCN6P51797 869 aa15.77■□□□□ 0.12
SEC23IP-204ENST00000462222 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
SEC23IP-204ENST00000462222 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
SEC23IP-204ENST00000462222 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
SEC23IP-204ENST00000462222 DCBLD2Q96PD2 775 aa15.52■□□□□ 0.08
SEC23IP-204ENST00000462222 ZNF579Q8NAF0 562 aaKnown RBP15.45■□□□□ 0.06
SEC23IP-204ENST00000462222 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
SEC23IP-204ENST00000462222 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
SEC23IP-204ENST00000462222 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
SEC23IP-204ENST00000462222 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
SEC23IP-204ENST00000462222 PLSCR2Q9NRY7 297 aa15.26■□□□□ 0.03
SEC23IP-204ENST00000462222 GALR2O43603 387 aaPredicted RBP15.24■□□□□ 0.03
SEC23IP-204ENST00000462222 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
SEC23IP-204ENST00000462222 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEC23IP-204ENST00000462222 OTUD5Q96G74 571 aa15.16■□□□□ 0.02
SEC23IP-204ENST00000462222 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
SEC23IP-204ENST00000462222 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
SEC23IP-204ENST00000462222 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
SEC23IP-204ENST00000462222 POTEB2H3BUK9 544 aa15.08■□□□□ 0
SEC23IP-204ENST00000462222 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
SEC23IP-204ENST00000462222 POTEMA6NI47 508 aa14.99□□□□□ -0.01
SEC23IP-204ENST00000462222 PELP1Q8IZL8 1130 aaKnown RBP14.97□□□□□ -0.01
SEC23IP-204ENST00000462222 ASTLQ6HA08 431 aaPredicted RBP14.95□□□□□ -0.02
SEC23IP-204ENST00000462222 SLC39A7Q92504 469 aa14.94□□□□□ -0.02
SEC23IP-204ENST00000462222 C7P10643 843 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms