RNA–Protein interactions for RNA: ENST00000462139.1

ZNF496-203, Transcript of zinc finger protein 496, humanhuman

TSL 1 (best)

Gene ZNF496, Length 9,243 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF496-203ENST00000462139 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
ZNF496-203ENST00000462139 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
ZNF496-203ENST00000462139 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
ZNF496-203ENST00000462139 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
ZNF496-203ENST00000462139 APLP2Q06481 763 aa16.34■□□□□ 0.21
ZNF496-203ENST00000462139 NISCHQ9Y2I1 1504 aa16.3■□□□□ 0.2
ZNF496-203ENST00000462139 MYT1Q01538 1121 aa16.27■□□□□ 0.2
ZNF496-203ENST00000462139 CCER1Q8TC90 406 aaPredicted RBP16.08■□□□□ 0.16
ZNF496-203ENST00000462139 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
ZNF496-203ENST00000462139 ERICH6Q7L0X2 663 aa15.92■□□□□ 0.14
ZNF496-203ENST00000462139 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
ZNF496-203ENST00000462139 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
ZNF496-203ENST00000462139 CENPBP07199 599 aaPredicted RBP15.84■□□□□ 0.13
ZNF496-203ENST00000462139 NEFLP07196 543 aa15.61■□□□□ 0.09
ZNF496-203ENST00000462139 YTHDC1Q96MU7 727 aaKnown RBP15.58■□□□□ 0.09
ZNF496-203ENST00000462139 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
ZNF496-203ENST00000462139 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
ZNF496-203ENST00000462139 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
ZNF496-203ENST00000462139 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
ZNF496-203ENST00000462139 DAXXQ9UER7 740 aaPredicted RBP15.36■□□□□ 0.05
ZNF496-203ENST00000462139 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
ZNF496-203ENST00000462139 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
ZNF496-203ENST00000462139 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
ZNF496-203ENST00000462139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
ZNF496-203ENST00000462139 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
ZNF496-203ENST00000462139 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
ZNF496-203ENST00000462139 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
ZNF496-203ENST00000462139 POLR3GLQ9BT43 218 aa14.89□□□□□ -0.03
ZNF496-203ENST00000462139 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
ZNF496-203ENST00000462139 CLSPNQ9HAW4 1339 aa14.83□□□□□ -0.04
ZNF496-203ENST00000462139 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
ZNF496-203ENST00000462139 ITGAEP38570 1179 aa14.75□□□□□ -0.05
ZNF496-203ENST00000462139 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.05
ZNF496-203ENST00000462139 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
ZNF496-203ENST00000462139 HRCP23327 699 aa14.63□□□□□ -0.07
ZNF496-203ENST00000462139 PPARGC1BQ86YN6 1023 aaKnown RBP14.62□□□□□ -0.07
ZNF496-203ENST00000462139 NEFMP07197 916 aa14.54□□□□□ -0.08
ZNF496-203ENST00000462139 CNGB1Q14028 1251 aaPredicted RBP14.53□□□□□ -0.08
ZNF496-203ENST00000462139 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
ZNF496-203ENST00000462139 DIEXFQ68CQ4 756 aaKnown RBP14.46□□□□□ -0.09
ZNF496-203ENST00000462139 TRIM52Q96A61 297 aa14.45□□□□□ -0.1
ZNF496-203ENST00000462139 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
ZNF496-203ENST00000462139 ANP32CO43423 234 aa14.43□□□□□ -0.1
ZNF496-203ENST00000462139 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
ZNF496-203ENST00000462139 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
ZNF496-203ENST00000462139 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
ZNF496-203ENST00000462139 ANP32BQ92688 251 aaKnown RBP14.35□□□□□ -0.11
ZNF496-203ENST00000462139 BCANQ96GW7 911 aa14.3□□□□□ -0.12
ZNF496-203ENST00000462139 ANP32AP39687 249 aaKnown RBP14.29□□□□□ -0.12
ZNF496-203ENST00000462139 NEUROD1Q13562 356 aa14.27□□□□□ -0.12
ZNF496-203ENST00000462139 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
ZNF496-203ENST00000462139 LOC105371045A0A1W2PR82 267 aa14.24□□□□□ -0.13
ZNF496-203ENST00000462139 ESF1Q9H501 851 aaKnown RBP14.22□□□□□ -0.13
ZNF496-203ENST00000462139 UPF2Q9HAU5 1272 aaKnown RBP14.21□□□□□ -0.13
ZNF496-203ENST00000462139 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
ZNF496-203ENST00000462139 CCDC180Q9P1Z9 1646 aa14.2□□□□□ -0.14
ZNF496-203ENST00000462139 FBLN2P98095 1184 aa14.15□□□□□ -0.14
ZNF496-203ENST00000462139 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
ZNF496-203ENST00000462139 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
ZNF496-203ENST00000462139 ABCC9O60706 1549 aa14.06□□□□□ -0.16
ZNF496-203ENST00000462139 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
ZNF496-203ENST00000462139 CDK11BP21127 795 aaKnown RBP14.05□□□□□ -0.16
ZNF496-203ENST00000462139 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
ZNF496-203ENST00000462139 ANP32EQ9BTT0 268 aa14.01□□□□□ -0.17
ZNF496-203ENST00000462139 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
ZNF496-203ENST00000462139 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
ZNF496-203ENST00000462139 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
ZNF496-203ENST00000462139 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
ZNF496-203ENST00000462139 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
ZNF496-203ENST00000462139 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZNF496-203ENST00000462139 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
ZNF496-203ENST00000462139 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
ZNF496-203ENST00000462139 NPM2Q86SE8 214 aaKnown RBP13.92□□□□□ -0.18
ZNF496-203ENST00000462139 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
ZNF496-203ENST00000462139 CHGAP10645 457 aaKnown RBP13.85□□□□□ -0.19
ZNF496-203ENST00000462139 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
ZNF496-203ENST00000462139 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.2
ZNF496-203ENST00000462139 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
ZNF496-203ENST00000462139 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
ZNF496-203ENST00000462139 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
ZNF496-203ENST00000462139 CCDC136Q96JN2 1154 aa13.79□□□□□ -0.2
ZNF496-203ENST00000462139 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
ZNF496-203ENST00000462139 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
ZNF496-203ENST00000462139 BECN1Q14457 450 aa13.79□□□□□ -0.2
ZNF496-203ENST00000462139 ARID3CA6NKF2 412 aa13.77□□□□□ -0.2
ZNF496-203ENST00000462139 GOLGA6L22H0YM25 854 aa13.76□□□□□ -0.21
ZNF496-203ENST00000462139 ZRSR1Q15695 479 aaKnown RBP13.75□□□□□ -0.21
ZNF496-203ENST00000462139 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
ZNF496-203ENST00000462139 FKBP8Q14318 412 aa13.74□□□□□ -0.21
ZNF496-203ENST00000462139 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
ZNF496-203ENST00000462139 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
ZNF496-203ENST00000462139 CASC1Q6TDU7 716 aa13.73□□□□□ -0.21
ZNF496-203ENST00000462139 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
ZNF496-203ENST00000462139 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
ZNF496-203ENST00000462139 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
ZNF496-203ENST00000462139 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
ZNF496-203ENST00000462139 MTUS2Q5JR59 1369 aa13.67□□□□□ -0.22
ZNF496-203ENST00000462139 CDCA8Q53HL2 280 aa13.66□□□□□ -0.22
ZNF496-203ENST00000462139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.226e-6■□□□□ 8.2
ZNF496-203ENST00000462139 A0A0G2JS52 829 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms