RNA–Protein interactions for RNA: ENST00000462080.1

GPCPD1-203, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-203ENST00000462080 AEBP2Q6ZN18 517 aaPredicted RBP35.47■■■■□ 3.27
GPCPD1-203ENST00000462080 CHIC1Q5VXU3 224 aa33.97■■■■□ 3.03
GPCPD1-203ENST00000462080 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
GPCPD1-203ENST00000462080 PHF23Q9BUL5 403 aaPredicted RBP29.87■■■□□ 2.37
GPCPD1-203ENST00000462080 FOXD1Q16676 465 aa28.12■■■□□ 2.09
GPCPD1-203ENST00000462080 PLPPR3Q6T4P5 718 aa27.29■■□□□ 1.96
GPCPD1-203ENST00000462080 PPP6R1Q9UPN7 881 aa26.51■■□□□ 1.83
GPCPD1-203ENST00000462080 ADRA2BP18089 450 aa26.44■■□□□ 1.82
GPCPD1-203ENST00000462080 PIAS4Q8N2W9 510 aaPredicted RBP26.37■■□□□ 1.81
GPCPD1-203ENST00000462080 MSH5O43196 834 aa26.24■■□□□ 1.79
GPCPD1-203ENST00000462080 POTEDQ86YR6 584 aa25.1■■□□□ 1.61
GPCPD1-203ENST00000462080 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
GPCPD1-203ENST00000462080 MAPK8IP2Q13387 824 aaPredicted RBP24.2■■□□□ 1.46
GPCPD1-203ENST00000462080 DMRT2Q9Y5R5 561 aa24.02■■□□□ 1.44
GPCPD1-203ENST00000462080 PPP4R3CPQ6ZMV5 832 aa23.94■■□□□ 1.42
GPCPD1-203ENST00000462080 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
GPCPD1-203ENST00000462080 HOXD11P31277 338 aaPredicted RBP23.24■■□□□ 1.31
GPCPD1-203ENST00000462080 RNF216Q9NWF9 866 aaPredicted RBP23.16■■□□□ 1.3
GPCPD1-203ENST00000462080 NCBP3Q53F19 620 aaKnown RBP23.12■■□□□ 1.29
GPCPD1-203ENST00000462080 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
GPCPD1-203ENST00000462080 NPM3O75607 178 aaKnown RBP22.78■■□□□ 1.24
GPCPD1-203ENST00000462080 KCNA4P22459 653 aa22.59■■□□□ 1.21
GPCPD1-203ENST00000462080 RNF39Q9H2S5 420 aa22.41■■□□□ 1.18
GPCPD1-203ENST00000462080 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
GPCPD1-203ENST00000462080 CACNB1Q02641 598 aaPredicted RBP22.33■■□□□ 1.17
GPCPD1-203ENST00000462080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.142e-8■■■■■ 27.2
GPCPD1-203ENST00000462080 C1QBPQ07021 282 aaKnown RBP22.1■■□□□ 1.13
GPCPD1-203ENST00000462080 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
GPCPD1-203ENST00000462080 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
GPCPD1-203ENST00000462080 SLC4A1APQ9BWU0 796 aaKnown RBP21.39■■□□□ 1.01
GPCPD1-203ENST00000462080 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
GPCPD1-203ENST00000462080 CAPN15O75808 1086 aa21.27■■□□□ 1
GPCPD1-203ENST00000462080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
GPCPD1-203ENST00000462080 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
GPCPD1-203ENST00000462080 APLP2Q06481 763 aa21.16■□□□□ 0.98
GPCPD1-203ENST00000462080 SAMD1Q6SPF0 538 aaPredicted RBP21.11■□□□□ 0.97
GPCPD1-203ENST00000462080 MYCNP04198 464 aaPredicted RBP21.08■□□□□ 0.97
GPCPD1-203ENST00000462080 DSG3P32926 999 aa21.08■□□□□ 0.97
GPCPD1-203ENST00000462080 FOXD4L1Q9NU39 408 aa21.01■□□□□ 0.95
GPCPD1-203ENST00000462080 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
GPCPD1-203ENST00000462080 ZNF219Q9P2Y4 722 aaPredicted RBP20.99■□□□□ 0.95
GPCPD1-203ENST00000462080 ABCB7O75027 752 aa20.8■□□□□ 0.92
GPCPD1-203ENST00000462080 ZBTB22O15209 634 aa20.77■□□□□ 0.92
GPCPD1-203ENST00000462080 ATF5Q9Y2D1 282 aaPredicted RBP20.54■□□□□ 0.88
GPCPD1-203ENST00000462080 POLA2Q14181 598 aa20.49■□□□□ 0.87
GPCPD1-203ENST00000462080 ATXN8OSP0DMR3 200 aa20.34■□□□□ 0.85
GPCPD1-203ENST00000462080 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
GPCPD1-203ENST00000462080 ZBTB12Q9Y330 459 aaPredicted RBP20.13■□□□□ 0.81
GPCPD1-203ENST00000462080 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
GPCPD1-203ENST00000462080 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
GPCPD1-203ENST00000462080 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
GPCPD1-203ENST00000462080 FBLN2P98095 1184 aa19.75■□□□□ 0.75
GPCPD1-203ENST00000462080 POTEHQ6S545 545 aa19.74■□□□□ 0.75
GPCPD1-203ENST00000462080 AKT1S1Q96B36 256 aa19.71■□□□□ 0.75
GPCPD1-203ENST00000462080 MKRN4PQ13434 485 aaPredicted RBP19.61■□□□□ 0.73
GPCPD1-203ENST00000462080 CHRDL2Q6WN34 429 aa19.55■□□□□ 0.72
GPCPD1-203ENST00000462080 SPDYE2BA6NHP3 402 aa19.52■□□□□ 0.72
GPCPD1-203ENST00000462080 SPDYE6P0CI01 402 aa19.52■□□□□ 0.72
GPCPD1-203ENST00000462080 SPDYE2Q495Y8 402 aa19.52■□□□□ 0.72
GPCPD1-203ENST00000462080 REM2Q8IYK8 340 aaPredicted RBP19.52■□□□□ 0.72
GPCPD1-203ENST00000462080 ZNF692Q9BU19 519 aaPredicted RBP19.32■□□□□ 0.68
GPCPD1-203ENST00000462080 PITPNM1O00562 1244 aa19.3■□□□□ 0.68
GPCPD1-203ENST00000462080 SSUH2Q9Y2M2 353 aa19.29■□□□□ 0.68
GPCPD1-203ENST00000462080 PIP4P2Q8N4L2 257 aa19.14■□□□□ 0.65
GPCPD1-203ENST00000462080 SPDYE1Q8NFV5 336 aaPredicted RBP19.11■□□□□ 0.65
GPCPD1-203ENST00000462080 FXR2P51116 673 aaKnown RBP eCLIP19.08■□□□□ 0.64
GPCPD1-203ENST00000462080 CLEC11AQ9Y240 323 aa19.06■□□□□ 0.64
GPCPD1-203ENST00000462080 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
GPCPD1-203ENST00000462080 SPDYE4A6NLX3 237 aa18.85■□□□□ 0.61
GPCPD1-203ENST00000462080 PRKAR2AP13861 404 aaKnown RBP18.81■□□□□ 0.6
GPCPD1-203ENST00000462080 PRR29P0C7W0 189 aa18.78■□□□□ 0.6
GPCPD1-203ENST00000462080 HAX1O00165 279 aa18.72■□□□□ 0.59
GPCPD1-203ENST00000462080 CHADLQ6NUI6 762 aa18.66■□□□□ 0.58
GPCPD1-203ENST00000462080 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
GPCPD1-203ENST00000462080 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
GPCPD1-203ENST00000462080 EVX2Q03828 476 aa18.49■□□□□ 0.55
GPCPD1-203ENST00000462080 C19orf67A6NJJ6 358 aa18.46■□□□□ 0.55
GPCPD1-203ENST00000462080 PROM2Q8N271 834 aa18.44■□□□□ 0.54
GPCPD1-203ENST00000462080 FARP1Q9Y4F1 1045 aaPredicted RBP18.42■□□□□ 0.54
GPCPD1-203ENST00000462080 CREBZFQ9NS37 354 aa18.38■□□□□ 0.53
GPCPD1-203ENST00000462080 CD44P16070 742 aaKnown RBP18.24■□□□□ 0.51
GPCPD1-203ENST00000462080 FKBP8Q14318 412 aa18.21■□□□□ 0.51
GPCPD1-203ENST00000462080 GABBR2O75899 941 aa18.11■□□□□ 0.49
GPCPD1-203ENST00000462080 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
GPCPD1-203ENST00000462080 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
GPCPD1-203ENST00000462080 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
GPCPD1-203ENST00000462080 ZNF579Q8NAF0 562 aaKnown RBP17.98■□□□□ 0.47
GPCPD1-203ENST00000462080 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
GPCPD1-203ENST00000462080 CLCN6P51797 869 aa17.94■□□□□ 0.46
GPCPD1-203ENST00000462080 MIER1Q8N108 512 aa17.94■□□□□ 0.46
GPCPD1-203ENST00000462080 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
GPCPD1-203ENST00000462080 PLCD3Q8N3E9 789 aa17.85■□□□□ 0.45
GPCPD1-203ENST00000462080 PHF12Q96QT6 1004 aa17.8■□□□□ 0.44
GPCPD1-203ENST00000462080 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
GPCPD1-203ENST00000462080 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
GPCPD1-203ENST00000462080 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
GPCPD1-203ENST00000462080 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
GPCPD1-203ENST00000462080 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
GPCPD1-203ENST00000462080 DCBLD2Q96PD2 775 aa17.7■□□□□ 0.42
GPCPD1-203ENST00000462080 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms