RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
CDK5RAP1-207ENST00000461710 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
CDK5RAP1-207ENST00000461710 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP1-207ENST00000461710 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP1-207ENST00000461710 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
CDK5RAP1-207ENST00000461710 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
CDK5RAP1-207ENST00000461710 HRCP23327 699 aa19.28■□□□□ 0.68
CDK5RAP1-207ENST00000461710 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
CDK5RAP1-207ENST00000461710 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
CDK5RAP1-207ENST00000461710 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
CDK5RAP1-207ENST00000461710 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.61
CDK5RAP1-207ENST00000461710 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP1-207ENST00000461710 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
CDK5RAP1-207ENST00000461710 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP1-207ENST00000461710 ABCC9O60706 1549 aa18.47■□□□□ 0.55
CDK5RAP1-207ENST00000461710 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP1-207ENST00000461710 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP1-207ENST00000461710 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
CDK5RAP1-207ENST00000461710 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
CDK5RAP1-207ENST00000461710 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
CDK5RAP1-207ENST00000461710 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP1-207ENST00000461710 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
CDK5RAP1-207ENST00000461710 SCAF1Q9H7N4 1312 aaKnown RBP18■□□□□ 0.47
CDK5RAP1-207ENST00000461710 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
CDK5RAP1-207ENST00000461710 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
CDK5RAP1-207ENST00000461710 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CDK5RAP1-207ENST00000461710 WIZO95785 1651 aa17.79■□□□□ 0.44
CDK5RAP1-207ENST00000461710 NACADO15069 1562 aa17.77■□□□□ 0.43
CDK5RAP1-207ENST00000461710 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP1-207ENST00000461710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP1-207ENST00000461710 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP1-207ENST00000461710 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP1-207ENST00000461710 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP1-207ENST00000461710 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
CDK5RAP1-207ENST00000461710 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
CDK5RAP1-207ENST00000461710 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP1-207ENST00000461710 ABCC8Q09428 1581 aa17.52■□□□□ 0.4
CDK5RAP1-207ENST00000461710 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
CDK5RAP1-207ENST00000461710 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CDK5RAP1-207ENST00000461710 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP1-207ENST00000461710 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP1-207ENST00000461710 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
CDK5RAP1-207ENST00000461710 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
CDK5RAP1-207ENST00000461710 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
CDK5RAP1-207ENST00000461710 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP1-207ENST00000461710 SOGA1O94964 1423 aa17.42■□□□□ 0.38
CDK5RAP1-207ENST00000461710 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
CDK5RAP1-207ENST00000461710 EEA1Q15075 1411 aa17.38■□□□□ 0.37
CDK5RAP1-207ENST00000461710 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP1-207ENST00000461710 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
CDK5RAP1-207ENST00000461710 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
CDK5RAP1-207ENST00000461710 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
CDK5RAP1-207ENST00000461710 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.35
CDK5RAP1-207ENST00000461710 MYT1Q01538 1121 aa17.25■□□□□ 0.35
CDK5RAP1-207ENST00000461710 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
CDK5RAP1-207ENST00000461710 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP1-207ENST00000461710 KIF21BO75037 1637 aa17.16■□□□□ 0.34
CDK5RAP1-207ENST00000461710 MIER1Q8N108 512 aa17.15■□□□□ 0.34
CDK5RAP1-207ENST00000461710 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
CDK5RAP1-207ENST00000461710 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP1-207ENST00000461710 CLIP1P30622 1438 aa17.1■□□□□ 0.33
CDK5RAP1-207ENST00000461710 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
CDK5RAP1-207ENST00000461710 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.33
CDK5RAP1-207ENST00000461710 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
CDK5RAP1-207ENST00000461710 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP1-207ENST00000461710 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
CDK5RAP1-207ENST00000461710 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
CDK5RAP1-207ENST00000461710 APLP2Q06481 763 aa16.95■□□□□ 0.3
CDK5RAP1-207ENST00000461710 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
CDK5RAP1-207ENST00000461710 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP1-207ENST00000461710 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.294e-8■■■■■ 30
CDK5RAP1-207ENST00000461710 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
CDK5RAP1-207ENST00000461710 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
CDK5RAP1-207ENST00000461710 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP1-207ENST00000461710 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
CDK5RAP1-207ENST00000461710 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
CDK5RAP1-207ENST00000461710 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
CDK5RAP1-207ENST00000461710 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
CDK5RAP1-207ENST00000461710 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-207ENST00000461710 RRBP1Q9P2E9 1410 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP1-207ENST00000461710 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP1-207ENST00000461710 CUX2O14529 1486 aa16.74■□□□□ 0.27
CDK5RAP1-207ENST00000461710 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
CDK5RAP1-207ENST00000461710 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
CDK5RAP1-207ENST00000461710 CUX1P39880 1505 aa16.6■□□□□ 0.25
CDK5RAP1-207ENST00000461710 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
CDK5RAP1-207ENST00000461710 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
CDK5RAP1-207ENST00000461710 MAPKBP1O60336 1514 aa16.57■□□□□ 0.24
CDK5RAP1-207ENST00000461710 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
CDK5RAP1-207ENST00000461710 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
CDK5RAP1-207ENST00000461710 ITGAEP38570 1179 aa16.51■□□□□ 0.23
CDK5RAP1-207ENST00000461710 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
CDK5RAP1-207ENST00000461710 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
CDK5RAP1-207ENST00000461710 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
CDK5RAP1-207ENST00000461710 ANP32EQ9BTT0 268 aa16.46■□□□□ 0.23
CDK5RAP1-207ENST00000461710 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
CDK5RAP1-207ENST00000461710 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
CDK5RAP1-207ENST00000461710 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
CDK5RAP1-207ENST00000461710 CFTRP13569 1480 aa16.43■□□□□ 0.22
CDK5RAP1-207ENST00000461710 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms